Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3163 ATGTCTTTCAACTTCAACAAGAAAACCCTAATGAAAAATCTTTTCTCATCTAACAAAAGTTTTGGTTGCATTAAATCAAAACCCTCTAATGTCATTCAACCCACTCAAAAACCAAAAATCTCCATTTACCAAAATAAAAACCCTAAACGGATCACTTCCTCCACCACCACTTCCTGCGACGGCAACGCCGGCGATGAAGATTATACATCCACTCCCATCTCGTACAATGACGGCAACATCAACGACAAAAACAATTATAGTATTTTAAAACCTGGAACTAAACTCGTCGATAGCATTGCCGTTGAGAAGGAGTCGGACGAGCCGTACGAAGATTTTCGAAAGTCGATACTTGAAATGATAATGGAGAGAGATATTTACTCTGAAAAAGATCTACAAGAACTTCTTGAATGTTTTCTTCAGCTTAATGCAAAGTGTCACCACCATGTCATTGTTGAAGCTTTCATGGAGATTTGTGAAAAAATATTCCCAAAGAAGATTTGTTGA 504 0.375 MSFNFNKKTLMKNLFSSNKSFGCIKSKPSNVIQPTQKPKISIYQNKNPKRITSSTTTSCDGNAGDEDYTSTPISYNDGNINDKNNYSILKPGTKLVDSIAVEKESDEPYEDFRKSILEMIMERDIYSEKDLQELLECFLQLNAKCHHHVIVEAFMEICEKIFPKKIC* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3163 167 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 4 165 - -
Tpr4g3163 167 ProSiteProfiles OVATE domain profile. 101 160 IPR006458 -
Tpr4g3163 167 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 99 160 IPR006458 -
Tpr4g3163 167 Pfam Transcriptional repressor, ovate 105 162 IPR006458 -
Tpr4g3163 167 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 165 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3163 Tpr-Chr4 37487827 37488584 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr4g3163 Ovate 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3163 - - mtr:MTR_5g079710 247.284