Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3105 ATGGTCACGGGTGACAATGTGAAAACTGCAAAGGCAATTGCTGTGGAATGTGGAATACTTAGTTCACTTGCTGATGCTATTGAGAGAACTGTCATTGAAGGCAAAACATTTCGAGCCTTGTCAGATTCAGAAAGAGAAGAAATTGCGGACTCAATATCGGTTATGGGAAGGTCATCTCCCAATGACAAACTATTGTTAGTACAAGCATTAAGGAGGAAGGGTCATGTTGTGGCTGTTACTGGGGATGGAACGAATGATGCTCCTGCACTTCACAAGGGATGA 282 0.4326 MVTGDNVKTAKAIAVECGILSSLADAIERTVIEGKTFRALSDSEREEIADSISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHKG* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3105 93 Pfam haloacid dehalogenase-like hydrolase 1 91 - -
Tpr4g3105 93 PANTHER CATION TRANSPORTING ATPASE 1 92 - -
Tpr4g3105 93 SUPERFAMILY HAD-like 1 91 IPR036412 -
Tpr4g3105 93 PANTHER CALCIUM-TRANSPORTING ATPASE 8, PLASMA MEMBRANE-TYPE 1 92 - -
Tpr4g3105 93 Gene3D - 1 92 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3105 Tpr-Chr4 36588463 36590164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3105 1 92 Primary Pumps ATPases AT5G57110 78.261 3.92e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3105 K01537 - gmx:100820121 159.458