Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3100 ATGTCATCAGGACCTCATGAAGATCACCAGATACTGCAAATCCGTAAATATGTTTACAGGCATGCTGTACACCTGACTGATATGCAGCCATATATCAACTGCTCCCAGATCCAGTCTTTCAAATCGAACAAGCAACTGGTTCTGATTTGTCATCCGCGTTGTGGATCAACATTGGATGATGCAACATCATGCAACAATGGGAGCATAAAATCAAAAGAAGCAAAAGGCTATCAGTACTGCTCCATAACTTGCATGGTGAAAGCTGCAAGGAAGTCTTCAATTCCTCCCAACGTTTCCATCCAGGCTCCGCCTCCTCAGGAATCACTGGTAGAAATTTCCAAGCCCTCTAAGCGGAAGAGGAAAAGAAAAGGAACTCCACACAGAGCTCCGTTATTCTAA 399 0.4411 MSSGPHEDHQILQIRKYVYRHAVHLTDMQPYINCSQIQSFKSNKQLVLICHPRCGSTLDDATSCNNGSIKSKEAKGYQYCSITCMVKAARKSSIPPNVSIQAPPPQESLVEISKPSKRKRKRKGTPHRAPLF* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3100 132 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 1 132 - -
Tpr4g3100 132 MobiDBLite consensus disorder prediction 115 132 - -
Tpr4g3100 132 Pfam PLATZ transcription factor 15 86 IPR006734 -
Tpr4g3100 132 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 132 - -
Tpr4g3100 132 MobiDBLite consensus disorder prediction 95 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3100 Tpr-Chr4 36479701 36483902 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tpr4g3100 PLATZ 9.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3100 - - mtr:MTR_5g077740 121.324