Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3097 ATGGATGCCCAAGCCAAGAAAAAAGCATTGTTCCGTGCCAAATTGAATGCCCAGAAGAAGGAAAAACGCATAGAATCTCCACTTGTTAGGTATAATGAATTTGATCAGCCTGTTTGCCGGGTTTGTGAAGTTGTTCTGAAGTCGGAGTCCCTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAATCTTAAAGCTAATGCGGCTGGGTTAACTAAGCAAAACAACGCAAAGCCTGATATTCCCAAGGCTAAACCTGAACAGTCTTCAAGCTCACAGTTCAAAATTCCCCAAAGTCCACAAGAAGTACCTAAACCTCAGTCATCATCAGTTCTTCCGCCAGATTTTTTTGACAACAATGATGCACAAAAGACAAGATATGAAAAGGACTCGGACTCAGATTTAGGTGGAAACGTGGGGCCTTCTGCTCAAAGTTTGGTGTCAAACTCGAAGGAGAAAGACCATTTCAATGGAAATAATACTACACAGTCTAAGGTTAATCAAGCAACAGTGGAGGCTAAGAAGACATCAGTCAAGACTATAGATGCAGAGACCAAACAAGGAAAAGGAGCTCTGCCTGAAGGGTTTTTTGATAATAAAGAGGCTGATTTGCGGGCACGTGGCATTAAGCTAGTTAAGCCAGATGTCAAAGATGAGTACAAGGAATTTGAGAAGCTGATTCAAGAGGACTTGCGAGAGGTGGATGATCGGTTGGAAGAAGAAGAGATTGATGCTGCAGAAATGATTGAAGAAGCTGAATCTGCTGAGCAAAAAAACTTAAAGGAGAAAGTGGAAATGTTGAAGAGGAAGAGATTGGAGCTAAAGGCTTCTAAATCTGCAAAGCTAAGTAAATCTTCTGATGTTGTAACCAAAGAGTCTAGACATGAAGATTCATCCAGTGATGATGAAAGTGGTGAGAATTTTGCTGTGGACTGGAGAGCACAACACTTGTGA 966 0.4172 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCEVVLKSESLWDAHQVSRKHREAISNLKANAAGLTKQNNAKPDIPKAKPEQSSSSQFKIPQSPQEVPKPQSSSVLPPDFFDNNDAQKTRYEKDSDSDLGGNVGPSAQSLVSNSKEKDHFNGNNTTQSKVNQATVEAKKTSVKTIDAETKQGKGALPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLREVDDRLEEEEIDAAEMIEEAESAEQKNLKEKVEMLKRKRLELKASKSAKLSKSSDVVTKESRHEDSSSDDESGENFAVDWRAQHL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3097 321 MobiDBLite consensus disorder prediction 70 118 - -
Tpr4g3097 321 MobiDBLite consensus disorder prediction 89 118 - -
Tpr4g3097 321 MobiDBLite consensus disorder prediction 281 313 - -
Tpr4g3097 321 Coils Coil 58 78 - -
Tpr4g3097 321 MobiDBLite consensus disorder prediction 141 179 - -
Tpr4g3097 321 PANTHER UNCHARACTERIZED 1 321 IPR040050 GO:0003676|GO:0005681|GO:0008270
Tpr4g3097 321 SUPERFAMILY beta-beta-alpha zinc fingers 31 72 IPR036236 -
Tpr4g3097 321 Coils Coil 228 281 - -
Tpr4g3097 321 MobiDBLite consensus disorder prediction 130 180 - -
Tpr4g3097 321 MobiDBLite consensus disorder prediction 281 321 - -
Tpr4g3097 321 Pfam Zinc-finger of C2H2 type 39 61 - -
Tpr4g3097 321 Gene3D Classic Zinc Finger 32 70 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3097 1 321 C2H2 Transcription Factor Family AT3G02860 52.568 1.63e-94 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3097 K13104 - gmx:100808515 432.18