Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3067 ATGTCTGATCAAGGGTCGGAGGAATTTAAAAACGAAGTTTTGTTGATTGCAAAACTTCAACATGGTAATCTTGTGAAGCTTCTTGGTTGTTGTATTCATAGAGAGGAAACATTGTTGATCTACGAATACTTGCCCAACAGGAGCTTAGACTACTTCATCTTTGATGAAACTAGAAGCAAACTCTTGGCGTGGTCAAAGCGTTCCGATATTATTGCTGGCATTGCTAGAGGACTTCTTTATCTCCACCAAGATTCTAGACTTAGAATTATTCACAGAGATTTGAAGTTAAGCAATATCTTGCTAGATGCCCATATGAATCCAAAAATCTCAGATTTTGGTCTGGCTCGGGAATTTTGTGGCGATCAAGTTGAAGCCAGAACAAGAAAATTGGTTGGAACATAG 402 0.3856 MSDQGSEEFKNEVLLIAKLQHGNLVKLLGCCIHREETLLIYEYLPNRSLDYFIFDETRSKLLAWSKRSDIIAGIARGLLYLHQDSRLRIIHRDLKLSNILLDAHMNPKISDFGLAREFCGDQVEARTRKLVGT* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3067 133 SUPERFAMILY Protein kinase-like (PK-like) 4 133 IPR011009 -
Tpr4g3067 133 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 133 - -
Tpr4g3067 133 Gene3D Transferase(Phosphotransferase) domain 1 44 133 - -
Tpr4g3067 133 ProSiteProfiles Protein kinase domain profile. 1 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3067 133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 89 101 IPR008271 GO:0004672|GO:0006468
Tpr4g3067 133 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 133 - -
Tpr4g3067 133 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
Tpr4g3067 133 Pfam Protein tyrosine and serine/threonine kinase 3 122 IPR001245 GO:0004672|GO:0006468
Tpr4g3067 133 SMART serkin_6 1 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3067 Tpr-Chr4 36008251 36015736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3067 2 133 Receptor kinase-like Gene Family AT4G11480 65.152 1.37e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr4g3067 PK_Tyr_Ser-Thr 4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3067 - - mtr:MTR_8g465570 246.514