Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3055 ATGGAGCATGAACAACGAAGCTTTGAAAGCTTCTTAACATGGACATCATCACACTTAGGAATATCAGATTCATCAACAACTACCAATCAATCTCATCACTCTTTGGGTCATTCTTTATGCGTTTCTATCTTTCCTCATTCTGGCGGTAGAGGTTTGGGTGCTGTGAGAGATCTTAAAAAGGGAGAACTTATTCTAAGAGTTCCAAAATCTGCTTTATTGACTAGTGAGTGTGTTATGGAAGATAAAAAACTTTGTCTTGCTGTTAATAGACACTCTTCTCTTTCCTCAGTTCAGATATTGACTGTTTGCTTGTTATACGAAGTCGGTAAAGGAAAAACTTCAAGGTGGCATCCTTACCTCGTGCATTTGCCGCAAAGTTACGACCTGCTAGCCATGTTTGGTGAATTTGAGAAACAAGCTCTGCAAGTTCAGTTTCTGTTAGAAATTTTAGTTTATCTCATTAGGTTAGATTATAGTATCTTGGCTAATGATGTTTATCAGAGCTTCATATGTGCTACTACTTATGTTATAAATAATTCATCTTGGTGTTATGGTTATCAGGTGGATGAAGCAATGTGGGTCACAGAAAAAGCTGTACAAAAAGCCAAATCAGAATGGAAAGAAGCTCTTGCCTTGATGGAAGATCTCATGTTTAAGCCTCAACTTCTAACATTTAAGGCTTGGGTTTGGGCCGCGGCAACGATATCTTCCCGGACATTGCATATACCATGGGATGAAGCTGGTTGTTTATGCCCTATTGGTGACTTGTTTAATTATGACGCACCTGGAGAGGAGCTATCTGGTATCGAGAATGTAACTGCCTTATCAAATGGAGACAAGAGTATAGATGTAGACGAAGAGCAGATCGATTTTCATTCACAGAGACTAACTGATGGTGGGTTTGAGGAAGATTCTAATGCATATTGCTTTTATGCCAGGACAAATTACAAGAAAGGCGATCAGGTTCTATTATGCTATGGAACATACACGAATTTGGAGCTTCTTGAACACTATGGATTTCTCTTACAAGAAAATCCAAATGACAAAATTTTCATCCCTTTGGAACCTGCTATGTACACTTCTACTTCATGGTCTAAGGAATCACTCTATATCCATCATGACGGGAAGCCTTCATTTGCGCTACTAGCTGCGTTACGATTGTGGGCAACCCCTCATAATAAAAGGAGGTCTGTCGGACATCTTGCATATTCCGGTTCTCAACTGTCTGCCGACAATGAAATTATTATTATGAAATGGTTGTCAAAAACTTGTGACGCTGTCTTAAAGAATATGCCGACATCAATTGAAGACGATACCTTACTCGTGAATGCATTAGATAGTACTATTAGTCAAGACTTAATAACTTTCATGAAGATTGCAAAACTTATGTCTTCTAGGGATGAAGTTTATACTTTCTTAGAAGCTCATAATATAACAGACGCGCTTAGTTTGAGTGAGATGATTTTATCTAAAAAAGCGAGAAGTTCAATGGAGAGATGGAAATTAGCTGTCCTATGGAGGCTCAGGTATAAGAAAGTCCTTGTTGATTGCATCTCTTATTGCAATAGAGTATTAGATTCTTTCATGAGATAA 1593 0.3817 MEHEQRSFESFLTWTSSHLGISDSSTTTNQSHHSLGHSLCVSIFPHSGGRGLGAVRDLKKGELILRVPKSALLTSECVMEDKKLCLAVNRHSSLSSVQILTVCLLYEVGKGKTSRWHPYLVHLPQSYDLLAMFGEFEKQALQVQFLLEILVYLIRLDYSILANDVYQSFICATTYVINNSSWCYGYQVDEAMWVTEKAVQKAKSEWKEALALMEDLMFKPQLLTFKAWVWAAATISSRTLHIPWDEAGCLCPIGDLFNYDAPGEELSGIENVTALSNGDKSIDVDEEQIDFHSQRLTDGGFEEDSNAYCFYARTNYKKGDQVLLCYGTYTNLELLEHYGFLLQENPNDKIFIPLEPAMYTSTSWSKESLYIHHDGKPSFALLAALRLWATPHNKRRSVGHLAYSGSQLSADNEIIIMKWLSKTCDAVLKNMPTSIEDDTLLVNALDSTISQDLITFMKIAKLMSSRDEVYTFLEAHNITDALSLSEMILSKKARSSMERWKLAVLWRLRYKKVLVDCISYCNRVLDSFMR* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3055 530 CDD SET_LSMT 48 341 - -
Tpr4g3055 530 Gene3D set domain protein methyltransferase, domain 1 5 341 - -
Tpr4g3055 530 PANTHER PROTEIN SET DOMAIN GROUP 40 4 144 - -
Tpr4g3055 530 PANTHER PROTEIN SET DOMAIN GROUP 40 186 515 - -
Tpr4g3055 530 Pfam Rubisco LSMT substrate-binding 375 514 IPR015353 -
Tpr4g3055 530 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 337 448 IPR036464 -
Tpr4g3055 530 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 186 515 - -
Tpr4g3055 530 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 144 - -
Tpr4g3055 530 Gene3D - 347 529 IPR036464 -
Tpr4g3055 530 Pfam SET domain 49 327 IPR001214 GO:0005515
Tpr4g3055 530 SUPERFAMILY SET domain 32 345 IPR046341 -
Tpr4g3055 530 ProSiteProfiles SET domain profile. 37 327 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tpr4g3055 SET 2.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3055 - - gmx:100787452 758.444