Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3019 ATGGAGTGGTTTACATGGGATAATGATAAAAGCTTCGAGGAAAACCTTTTAGAATCTCCAGAAGAGATACTTGAGGGACAATCTCTTGTTCCCAGACAATTAGCGGCCAAAGTAAAGGAGCACACTCAAATGATCGAGGAAGGTAATTTCGAGTTGCCAACACACAAATATGATTGTATTCCAAAATACAATACTTCGACCGATGTGAACAAAGTTCCTCCACTTATGAAAAAAATCAAGAAAGTGCAACATTGGAAAGAAGAAGAACACAGGTTATTTCTCGAGGGGCTCGAGAAGTATGGCAAGGGAAATTGGAAAGCTATTTCGAAGTATGTTGGCACAAAATCTTATACTCAAGTTGCTAGCCATGCTCAAAAGTATTTCATTCGAGTTGATCAACAAAATGTTGATTCATCAAAAAAGAGTAAAAGAAGAAGTAAATTTGACACTACCTTATGGAACGGAAATTTCCACCCTCTTCTCTATAGGGACTACATTCCTCCTCCTCCTCCAAATGTTGAGACACAACCAATTGTAGAGCAGTTACTGCAACAATTTCAACAAGCCCAAAAAGCATTGTAG 582 0.3832 MEWFTWDNDKSFEENLLESPEEILEGQSLVPRQLAAKVKEHTQMIEEGNFELPTHKYDCIPKYNTSTDVNKVPPLMKKIKKVQHWKEEEHRLFLEGLEKYGKGNWKAISKYVGTKSYTQVASHAQKYFIRVDQQNVDSSKKSKRRSKFDTTLWNGNFHPLLYRDYIPPPPPNVETQPIVEQLLQQFQQAQKAL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3019 193 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 4 187 IPR043363 -
Tpr4g3019 193 CDD SANT 85 128 IPR001005 -
Tpr4g3019 193 ProSiteProfiles SANT domain profile. 85 132 IPR017884 -
Tpr4g3019 193 SMART sant 81 130 IPR001005 -
Tpr4g3019 193 Pfam Myb-like DNA-binding domain 84 128 IPR001005 -
Tpr4g3019 193 SUPERFAMILY Homeodomain-like 80 132 IPR009057 -
Tpr4g3019 193 ProSiteProfiles Myb-like domain profile. 85 128 IPR001005 -
Tpr4g3019 193 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 80 130 IPR006447 GO:0003677
Tpr4g3019 193 PANTHER SYRINGOLIDE-INDUCED PROTEIN 1-3-1B 4 187 - -
Tpr4g3019 193 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 132 IPR017930 -
Tpr4g3019 193 Gene3D - 83 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3019 Tpr-Chr4 35049410 35050272 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr4g3019 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3019 - - mtr:MTR_1g083180 158.303