Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g3012 | ATGACCGAAGTTACATTGAATTCAATTGTCAATAACTTATTCTTATACCTTACAGTTAAAAAAGTCACCATGAAGTTCTACAGACCTCCGTTGCAATCTTTCTTTTTTATCATTGTTATTCTTTTTCCTCTAGTTACTTCTGACCTGAATTCCGATAAGCAAGCCCTTCTTGATTTTGTTTCTTCCGTCCCTCATCGTCGCAACCTTAAATGGGACCTAGCTACCTCAATATGTACATCTTGGATAGGCATAACTTGTAATCCAAACCAAACTCGTGTTGTTTCTGTCCGGCTCCCTGGAGTCGGATTAGTAGGCACCATTCCAGCCAATACACTTGGCAAAATTGACTCACTCAAAACTATAAGCCTTCGCTCGAACCTACTTAGTGGAAGTCTACCTCCTGATATTACTTCTCTTCCGTCTCTACAATATCTCTTCCTTCAACATAATAATCTTTCTGGTGAATTGCCAACCTCATTATCGTCGCAACTCAATGCACTTGTTTTGTCATACAATTCATTCAAAGGTAGAATTCCAAAGACATTGCTAAATTTAACACAATTAACTCGATTGAGCCTCGAGAACAACTCATTATCTGGACCGATACCGGATTTCCATGTCAACCTCAAATATTTGAATTTAAGCTACAACCATTTGAATGGCTCTATCCCTTCATCTCTTCATAACTTCTCAAGTTCATCCTTTGAAGGAAACTCCCTTTTATGTGGATTGCCTCTAAAGCCGTGTTCCAGAGTCCCTCCTTCACCGGCTCCTCCTGCATTGGCTCCTGTAAAACACGGCTCAAAAAATAAACTGAGTAAAGGAGCTATCATTGCAATTGCTGTTGGTGGAGCTGTTCTGTTGTTTTTCGTAGCACTTGTCATTGTTCTTTGTTGTTTAAAGAAAAAAGATAATGGAACCTCGAGAGAAGTTAAAGCGAAGGGTCCTATTGGTGGTGGTGGAAGGAATGAAAAGCCGAAAGAAGAGTTTGGAAGTGGAGTTCAAGAATCTGAGAAAAACAAATTGGTTTTCTTTGAGGGCTGCTCTTATAATTTTGATCTCGAGGATTTGTTGAGGGCTTCAGCTGAGGTTCTCGGAAAGGGTAGTTATGGTACTGCTTATAAGGCTATTTTAGAAGAGTTAACGACAGTTGTAGTGAAAAGGTTGAAAGAAGTTGTGGTTGGCAAGAGGGAATTTGAACAGCAGATGGAGATTATAGGAAGCATTGGAAGTCACCCGAATGTCGTTCCGCTTCGCGCTTATTATTATTCGAAGGATGAGAAGCTTTTGGTTTGTGACTATTACCCAAATGGAAATCTATCTATACTCTTGCATGGTACTAGGACAGGTGGAAGAACAACTTTAGATTGGAACACGCGAGTAAAAATCACTCTCGGAATTGCCCGAGGAATTGCTCATTTACATTCAGTAGGTGGTCCAAAATTTGCACATGGAAATGTGAAATCCTCCAATGTCCTCCTAAACCAAGATAACGATGGCTGCATTTCCGATTTCGGCCTGACTCCGCTCATGAACGTCCCGGCAACCCCTTCTAGAGCCGCAGGCTACCGTGCTCCTGAAGTAATTGAAACTCGGAAGCACACTCATAAATCAGATGTATACAGTTTTGGCGTCCTCCTTTTGGAAATGCTTACAGGTAAAGCGCCACAACAGTCTCCGGTACGCGATGACATGGTTGATCTCCCTAGATGGGTTCAGTCCGTTGTTCGGGAGGAGTGGACCGCTGAGGTTTTCGACGTGGAGCTAATGAGGTACCAAAATATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGGCATGGCTTGTGTCGCAAAGGTTCCAGATATGAGGCCTAACATGGAGGAAGTAGTGAGAATGATTGAAGAAATTCGGCAATCTGACTCGGATAACCGACCATCTTCTGACGATAATAAATCCAAGGATTTAACTGTTCAAACTCCCTGA | 1965 | 0.4178 | MTEVTLNSIVNNLFLYLTVKKVTMKFYRPPLQSFFFIIVILFPLVTSDLNSDKQALLDFVSSVPHRRNLKWDLATSICTSWIGITCNPNQTRVVSVRLPGVGLVGTIPANTLGKIDSLKTISLRSNLLSGSLPPDITSLPSLQYLFLQHNNLSGELPTSLSSQLNALVLSYNSFKGRIPKTLLNLTQLTRLSLENNSLSGPIPDFHVNLKYLNLSYNHLNGSIPSSLHNFSSSSFEGNSLLCGLPLKPCSRVPPSPAPPALAPVKHGSKNKLSKGAIIAIAVGGAVLLFFVALVIVLCCLKKKDNGTSREVKAKGPIGGGGRNEKPKEEFGSGVQESEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEELTTVVVKRLKEVVVGKREFEQQMEIIGSIGSHPNVVPLRAYYYSKDEKLLVCDYYPNGNLSILLHGTRTGGRTTLDWNTRVKITLGIARGIAHLHSVGGPKFAHGNVKSSNVLLNQDNDGCISDFGLTPLMNVPATPSRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPQQSPVRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDMRPNMEEVVRMIEEIRQSDSDNRPSSDDNKSKDLTVQTP* | 655 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g3012 | 654 | SUPERFAMILY | L domain-like | 54 | 249 | - | - | |
Tpr4g3012 | 654 | Gene3D | Ribonuclease Inhibitor | 49 | 207 | IPR032675 | - | |
Tpr4g3012 | 654 | Pfam | Leucine rich repeat N-terminal domain | 50 | 87 | IPR013210 | - | |
Tpr4g3012 | 654 | PANTHER | LRR RECEPTOR-LIKE KINASE | 16 | 654 | - | - | |
Tpr4g3012 | 654 | PANTHER | OS05G0588300 PROTEIN | 16 | 654 | - | - | |
Tpr4g3012 | 654 | MobiDBLite | consensus disorder prediction | 629 | 645 | - | - | |
Tpr4g3012 | 654 | MobiDBLite | consensus disorder prediction | 629 | 654 | - | - | |
Tpr4g3012 | 654 | ProSitePatterns | Protein kinases ATP-binding region signature. | 365 | 396 | IPR017441 | GO:0005524 | |
Tpr4g3012 | 654 | Pfam | Leucine Rich Repeat | 208 | 230 | IPR001611 | GO:0005515 | |
Tpr4g3012 | 654 | MobiDBLite | consensus disorder prediction | 311 | 333 | - | - | |
Tpr4g3012 | 654 | ProSiteProfiles | Protein kinase domain profile. | 359 | 654 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g3012 | 654 | ProSiteProfiles | Leucine-rich repeat profile. | 208 | 230 | IPR001611 | GO:0005515 | |
Tpr4g3012 | 654 | Gene3D | Ribonuclease Inhibitor | 209 | 250 | IPR032675 | - | |
Tpr4g3012 | 654 | Gene3D | Phosphorylase Kinase; domain 1 | 327 | 434 | - | - | |
Tpr4g3012 | 654 | SUPERFAMILY | Protein kinase-like (PK-like) | 363 | 637 | IPR011009 | - | |
Tpr4g3012 | 654 | Pfam | Protein kinase domain | 362 | 625 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g3012 | 654 | CDD | STKc_IRAK | 365 | 630 | - | - | |
Tpr4g3012 | 654 | Gene3D | Transferase(Phosphotransferase) domain 1 | 435 | 653 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g3012 | Tpr-Chr4 | 34964922 | 34969013 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g3012 | 31 | 652 | Receptor kinase-like Gene Family | AT5G58300 | 68.720 | 0.0 | 856 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Tpr4g3012 | Pkinase | 1.2e-36 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g3012 | - | - | gmx:100818344 | 973.77 |