Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3010 ATGGATCTTTCCACTGAGTTTGATGACCTAATTCCCTACCACTTACTAGAGAGTTTAAGAGTCTTTGTGATTGATCATGACACCACTCAACTTCATGTCATTGCAAATATGTGTATTGAATGCAACTATCAAGTTATCACATCCACTTTGGCTTCTTTTGCCCTAAATCTTTTGAGACAAACAAAGGGTCCTTTTTTTGATTTGATATTAATTGATGATCAAATGCCGGATATGGATTCGTACGACTTTTTGCAACATGTTACACAAGAAATTAAAATTCCGGTCATTATGATGGGTGTTGATGACACAACAAGTGAAAGGATGAATGGGGCTTGTGATTATTGGCTAAAACCTTTGAATCCGAATTATATCAAAAACATGTCGCAACATGTTGCAACAATTCAACATGATCAAATTGAAAGAGTGTCGGAGGTGGTCAAAACAGGACAAAAACGAAAGAAAAGAGATGAAGAAAGTGAAACAAAGAAGAATCGGGTATCATGGGTGTCATCACCGGAGCTTCAAGACAAATTTTTAAGAGCTGTGAATCAACTTGGCATTGAAAAGGCAACGCCAAAACAAATTACTGAATTGATGGATGTTCGGGGTTTGGAAACCTCGCATGTTGCTAGTCATTTGCAGAAATTCAGAATTCGTCATTTCAATTGTTCAAGTAAAAAGACAAAGCCAAAAAGTGGAAGGGCCAATTCAAATGTTCCTCATGAAAGCATTCAAGTTGTTGAGTCAATGCCAGAACAAGATAAAAAATTTGATAGCAATTTTCTTCATGCACAGCAACAACATCCGATTCCGATGGTGTTTGATGATTTTGAAGTTTCCAATATTTTGAGTAACAAAACCAACATGATGCTAGATGATTCATCATCATTATATTTTGACTAG 903 0.361 MDLSTEFDDLIPYHLLESLRVFVIDHDTTQLHVIANMCIECNYQVITSTLASFALNLLRQTKGPFFDLILIDDQMPDMDSYDFLQHVTQEIKIPVIMMGVDDTTSERMNGACDYWLKPLNPNYIKNMSQHVATIQHDQIERVSEVVKTGQKRKKRDEESETKKNRVSWVSSPELQDKFLRAVNQLGIEKATPKQITELMDVRGLETSHVASHLQKFRIRHFNCSSKKTKPKSGRANSNVPHESIQVVESMPEQDKKFDSNFLHAQQQHPIPMVFDDFEVSNILSNKTNMMLDDSSSLYFD* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3010 300 MobiDBLite consensus disorder prediction 145 164 - -
Tpr4g3010 300 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 16 240 - -
Tpr4g3010 300 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 240 IPR045279 GO:0009736
Tpr4g3010 300 ProSiteProfiles Response regulatory domain profile. 20 132 IPR001789 GO:0000160
Tpr4g3010 300 SUPERFAMILY Homeodomain-like 162 219 IPR009057 -
Tpr4g3010 300 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 163 219 IPR006447 GO:0003677
Tpr4g3010 300 MobiDBLite consensus disorder prediction 145 165 - -
Tpr4g3010 300 SMART REC_2 19 128 IPR001789 GO:0000160
Tpr4g3010 300 Gene3D - 14 137 - -
Tpr4g3010 300 CDD REC_typeB_ARR-like 21 132 - -
Tpr4g3010 300 SUPERFAMILY CheY-like 17 136 IPR011006 -
Tpr4g3010 300 Pfam Response regulator receiver domain 21 126 IPR001789 GO:0000160
Tpr4g3010 300 Gene3D - 159 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3010 Tpr-Chr4 34956416 34957318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3010 18 218 Response Regulator Gene Family AT4G31920 37.500 2.39e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr4g3010 Response_reg 6.8e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3010 - K14491 mtr:MTR_6g045327 196.823