Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3005 ATGGCAGATGAAACACCAAATGATTTGAAGGAGGAGGTTGTTGATATTGCACCATTCGATCCTACTAAGAAGAAGAAAAAGAAGAAAGTTACAGTTGTAGATCCGGCAGATGATGAATCAGTGGATAAATTGACCGAGAAGACAGAAAATCTGTCAGTTTCTGATGGGATTGATACATTTGCTGGTTTGAAAAAGAAGAAGAAGAAGAAGCCTGTTGAAATCACTAACTTAAACGAGGAGAGTGGAGATGCAGTCGAAGATTTGGATGATTATGCTGAAGATGATGAAGAAGAAGCAGTTGCTTTGCATCCTCGTTATCCTTGGGAAAGGAGTGACCGTAATTATCAATATGAGGAGCTTCTTGGCAGGGTGTTTAATATTCTACGCGAAAATAATCCAGAACTTTCTGGCGGTCCGCAAAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACCGTTTTTGTGAATTTTATGGATCTGTGCAAAACGATGCATCGACAGCCAGACCATGTTATGGCTTTCTTGCTTTCTGAACTCGGTACTACTGGCTCCCTAGATGGACAACAGAGATTGGTTGTAAAGGGAAGATTTGCACCAAAGAATTTTGAAGGAATTCTACGACGATATGTCAATGAATACGTTATTTGTCTTGGATGCAAGAGTCCAGACACACTACTTACAAAGGAGAATCGTCTATTCTTTCTCCGGTGTGAGAAGTGTGGATCAGGAAGATCGGTTCTTCAAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGAATGCAGGCGGAACATGA 813 0.4157 MADETPNDLKEEVVDIAPFDPTKKKKKKKVTVVDPADDESVDKLTEKTENLSVSDGIDTFAGLKKKKKKKPVEITNLNEESGDAVEDLDDYAEDDEEEAVALHPRYPWERSDRNYQYEELLGRVFNILRENNPELSGGPQRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLSELGTTGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTLLTKENRLFFLRCEKCGSGRSVLQIKAGFVARVGRRNAGGT* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3005 270 PANTHER BNAA02G05130D PROTEIN 1 266 - -
Tpr4g3005 270 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 115 221 IPR016189 GO:0003743|GO:0006413
Tpr4g3005 270 Pfam Domain found in IF2B/IF5 140 247 IPR002735 GO:0003743|GO:0006413
Tpr4g3005 270 Gene3D - 112 254 - -
Tpr4g3005 270 MobiDBLite consensus disorder prediction 1 37 - -
Tpr4g3005 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 266 IPR045196 GO:0003743|GO:0006413
Tpr4g3005 270 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743|GO:0006413
Tpr4g3005 270 MobiDBLite consensus disorder prediction 1 22 - -
Tpr4g3005 270 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 252 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3005 Tpr-Chr4 34873652 34879475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3005 1 265 Eukaryotic Initiation Factors Gene Family AT5G20920 71.642 2.55e-128 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3005 K03238 - gmx:100783618 431.409