Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3001 ATGCTGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTACATGCCGATGGTTAATGAAAATTTTTCGAGTGGTGGTACAACTAATTTTCCCGAATTTTCAACACAAATAACTATTGCTAATGAAGATTCAACTCCTAAGAGCAAGAAAAACCAGCAACCATCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATCAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTCAAATTGCTGACTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGAGTTGCATGCCGAAACCGTTTTAATTATATGAACAAAATACTGGGTAAATGGATAGGCGCTTATGATGGCGCTAAGCGTCTCCAAGGAAGTGGTTGGTCCGAGAATGATGTTTTGGCAAAAGCGCAGGAAATATATGCATGTGGGAAGAATGTTCGGTGCTTACTATAG 486 0.4074 MLRNPSQTPPFNGYMPMVNENFSSGGTTNFPEFSTQITIANEDSTPKSKKNQQPSWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGQIADYCNEHCSFDPPRDGVACRNRFNYMNKILGKWIGAYDGAKRLQGSGWSENDVLAKAQEIYACGKNVRCLL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3001 161 PANTHER PUTATIVE-RELATED 1 158 - -
Tpr4g3001 161 PANTHER - 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3001 Tpr-Chr4 34806093 34806578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3001 22 151 Glutathione S-transferase Gene Family AT5G41240 30.370 3.89e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3001 - - mtr:MTR_3g067785 257.299