Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2981 ATGGGGAAAAACATTGTTCCAGTGAAATCTGTTGTGTATGCTCTTTCTCCTTTCCAGCAGAAAATCATGTCCGGTTTATGGAAGGATTTACCTACCAAAATTCATCACAAGGTTTCTGAAAATTGGATCAGCGCTCTTCTTTTGATTACTCCCGTCGTCGGAACCTACTCGTATGCTATGCACTATGTGGAACAGGAGAAGCTGCACCACAGGTACTGA 219 0.4292 MGKNIVPVKSVVYALSPFQQKIMSGLWKDLPTKIHHKVSENWISALLLITPVVGTYSYAMHYVEQEKLHHRY* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2981 72 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 1 72 IPR020101 GO:0005750|GO:0070469
Tpr4g2981 72 PANTHER CYTOCHROME B-C1 COMPLEX, SUBUNIT 8 1 72 - -
Tpr4g2981 72 Gene3D - 4 72 IPR036642 GO:0005750|GO:0006122
Tpr4g2981 72 SUPERFAMILY Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11 65 IPR036642 GO:0005750|GO:0006122
Tpr4g2981 72 Pfam Cytochrome b-c1 complex subunit 8 1 72 IPR020101 GO:0005750|GO:0070469
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2981 Tpr-Chr4 34243578 34245583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2981 1 72 Chloroplast and Mitochondria Gene Families AT5G05370 76.389 3.38e-38 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2981 - - mtr:MTR_5g075690 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2981 4 34243578 34245583 Tpr4g2981 4 34243578 34245583 ECH