Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2968 ATGGCAGATGAAACACCAAATGATTTGAAGGAGGAGGTTGTTGATATTGCGCCATTCGATCCTACTAAGAAGAAGAAAAAGAAGAAAGTTACAGTTGTAGATCCGGCAGATGATGAATCAGTGGATAAATTGACCGAGAAGACAGAAAATCTGTCAGTTTCTGATGGGATTGATACATTTGCTGGTTTGAAAAAGAAGAAGAAGAAGCCTGTTGAAATCACTAACTTAAATGAGGAGAGTGGAGATGCAGTCGAAGATTTGGATGATTATGCTGAAGATGATGAAGAAGAAGCGGTTGCTTTGCATCCTCGTTATCCTTGGGAAAGGAGTGACCGTAATTATCAATATGAGGAGCTTCTTGGCAGGGTGTTTAATATTCTACGTGAAAATAATCCAGAACTTTCTGGCGGTCCGCAAAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACCATTTTTGTGAATTTTATGGATCTGTGCAAAACGATGCATCGACAGCCAGACCATGTTATGGCTTTCTTGCTTTCTGAACTCGGTACTACTGGCTCCCTAGACGGACAACAGAGATTGGTTGTAAAGGGAAGATTTGCACCAAAGAATTTTGAAGGAATTCTACGACGATATGTCAATGAATACGTTATTTGTCTTGGATGCAAGAGTCCAGACACACTACTTACAAAGGAGAATCGTCTATTCTTTCTCCGGTGTGAGAAGTGTGGATCAGGAAGATCGGTTCTTCAAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGAATGCAGGCGGAACATGA 810 0.416 MADETPNDLKEEVVDIAPFDPTKKKKKKKVTVVDPADDESVDKLTEKTENLSVSDGIDTFAGLKKKKKKPVEITNLNEESGDAVEDLDDYAEDDEEEAVALHPRYPWERSDRNYQYEELLGRVFNILRENNPELSGGPQRTVMRPPQVLREGTKKTIFVNFMDLCKTMHRQPDHVMAFLLSELGTTGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTLLTKENRLFFLRCEKCGSGRSVLQIKAGFVARVGRRNAGGT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2968 269 Gene3D - 111 253 - -
Tpr4g2968 269 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 220 IPR016189 GO:0003743|GO:0006413
Tpr4g2968 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 265 IPR045196 GO:0003743|GO:0006413
Tpr4g2968 269 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
Tpr4g2968 269 MobiDBLite consensus disorder prediction 1 37 - -
Tpr4g2968 269 MobiDBLite consensus disorder prediction 1 22 - -
Tpr4g2968 269 Pfam Domain found in IF2B/IF5 139 246 IPR002735 GO:0003743|GO:0006413
Tpr4g2968 269 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 251 IPR016190 GO:0003743|GO:0006413
Tpr4g2968 269 PANTHER BNAA02G05130D PROTEIN 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2968 Tpr-Chr4 34091207 34096969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2968 1 264 Eukaryotic Initiation Factors Gene Family AT5G20920 71.536 5.69e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2968 K03238 - gmx:100783618 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2968 4 34091207 34096969 Tpr4g2968 4 34091207 34096969 ECH