Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2963 ATGGGGGTTGAAGTTTGCATGAATAAATTGTGTAAGGAAAGTTCTATTGGTGAATGGAAGAAAGGTTGGTCTTTGATCTCTGGTGGATTTGCAAAACTCTGCAACAAATGCGGACTTGCCTATGAGAATTCAGTTTTCTGCGATCAATTTCACCGTCTTGAAGCCGGTTGGAGGGAATGCAACAATTGCAAGAAGCTTATCCACTGCGGATGTATAGTATCAAAGTCTTTGTTCGAGTACCTTGATTTCGGTGGCATAGGGTGTGTTACCTGTGTTAAGGCTTCCCAGCTTTGTCTGGATGCTGGAAATGCTAATAGGTTTGCTCATATAACTAAAAACAATGCAAATGATCGATATGCAGAACATACTGATGGTGGACTCTCGGTGGAACGTGTTGGTAAAGGAAACCTTATGCAGTTACGGAAAACTGCTGAAGCTGGTGAAACAAGCTTTTGGCCACAAGCTCAAAGAGATGGTGTGTTTTCGAGTATTGGTTCAAAAAGCGAAGAAATTAATTGTCGATTCAACAAAACTGATACAGGATTTTTAAATGTGATGAAACATTCTAGTCATTTATCAGCACTTACTACATCAGAAAATAATAGACCAACATGGGAGACCAAAAGTAGAGATGAATCACTTTCGCTGAAGATTTCTCTTGGAACCTCATCGAGAAATTGTGTCCTGCCTTCTGCCAAAGAGATTGTAGAAGGTAAACTTGAGGGTAAAGCATCTTCTATTTCTCAACAAGGGCACAATTCTTACCCTATATTGGCTAAACAACCGAAGACCGGTATTACATTGAATCTTGAAACAAATAAAGGCATGATTTCTCTTCCACGCATTGGTCGACCACCTGCTGATGTGAAAGGGAAAAATCAGTTACTTTCTCGATACTGGCCGAGGATTACTGATCAAGAGCTGGAGAAATTGTCTGGGGATTTGAAGTCTAAGATAGTGCCCTTATTTGAGAAGGTGTTAAGTCCGAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTCCCAAAAGCTTGTGCTGAGGCTTTTCTTCCTCCTATTGATCAATCGGAAGGTGTCCCTTTACTGTTCCAAGATATAAAGGGGAACGAGTGGACCTTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTAGAGGGTGTGACCCCGTGCATACAATTCTTGCGGTTAAATGCTGGCGATACTGTGACATTTAGTCAGATAGATTCCGGAGAAAAATTTGTACTTGGTTTTAGAAGAGCATCGGGTTCTACCGATACGCAGGATGACTCTACATCTGCTCATTCTAACGGGATTTCGACTAAGGATACAAATGTTTCTGGTGCAACTAAAAATCTGAACTCGTTAAGTAGTTTTTCTGATCTTCTTCAATCAATGAAAGGTAACAGGGAACCTTACTTAAATGGACATTCAAAACATCTGCATTTGGGTAATGGAACTGCTGATTGGCTGAAAACTGCACATTGTGAGGAGGCGGCGAACAATGGTCCATTGCAGCAACAGGTTTCGGTTTCAGATAAGAAAAAGACTTGCAAGATTGGGACGAAAACTAAGAGGTTGCACATTCGTAGTGAAGATTCTTTGGAGTTAAGACTTACATGGGAAGAAGCACAAGACTTGCTTTGTCCGCCGCCTAATGTCAAGCCAAATATTGTACAAATCGACGACCAAGTATTCGAAGAATATGATGAACCCCCGGTTTTCGGAAAGGGAACTATAACCAATGCCTGTCCATCTGGCTCTCCATGTTCTGCATCAGAGCAGCTCGGTCCAAACGAACAAGAAAATCTTCAGCGAACCAGAAAAGCTTCTAAAAAGCGAAAAATTGTAGAAAAGAGTAACTCAATTGAAGAAGACAAGCTTCAAGACCTAGATACTCTTGCAAGTATGGCAATTTTAGGAGACAATCTTGCTGACCTTGACGAGCCAACTTCAGCTGGAATCACCACAAAACATCCGAGACATCGTGATGGATGCACTTGTATCGTCTGCATTCAATCCCCAAGTGGACAAGGAAAACATAAACCGACATGCACTTGCCTTGCCTGTGAAACTTTGAAGCGCAGGTCCAAGACTCTTATGATGCGTAAGAAGAAAAACCAATCAGAATCTGAAGCAGCCGCTCCCCAAAATGATCAAACGAATCATAGCGGTGAAGCAGATACCAGTGGTGATGCATCAAGACAAGATACAAGTAACTCAACGGACGAGGTAAGCCTAAACGGTGGTCAGAAAGAGGCTGTTGAGCCTAGTGCCGCGGGACAATTAGATTTGAATTGTCATCCCGATCATGAAGATATGTAA 2331 0.4187 MGVEVCMNKLCKESSIGEWKKGWSLISGGFAKLCNKCGLAYENSVFCDQFHRLEAGWRECNNCKKLIHCGCIVSKSLFEYLDFGGIGCVTCVKASQLCLDAGNANRFAHITKNNANDRYAEHTDGGLSVERVGKGNLMQLRKTAEAGETSFWPQAQRDGVFSSIGSKSEEINCRFNKTDTGFLNVMKHSSHLSALTTSENNRPTWETKSRDESLSLKISLGTSSRNCVLPSAKEIVEGKLEGKASSISQQGHNSYPILAKQPKTGITLNLETNKGMISLPRIGRPPADVKGKNQLLSRYWPRITDQELEKLSGDLKSKIVPLFEKVLSPSDAGRIGRLVLPKACAEAFLPPIDQSEGVPLLFQDIKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQFLRLNAGDTVTFSQIDSGEKFVLGFRRASGSTDTQDDSTSAHSNGISTKDTNVSGATKNLNSLSSFSDLLQSMKGNREPYLNGHSKHLHLGNGTADWLKTAHCEEAANNGPLQQQVSVSDKKKTCKIGTKTKRLHIRSEDSLELRLTWEEAQDLLCPPPNVKPNIVQIDDQVFEEYDEPPVFGKGTITNACPSGSPCSASEQLGPNEQENLQRTRKASKKRKIVEKSNSIEEDKLQDLDTLASMAILGDNLADLDEPTSAGITTKHPRHRDGCTCIVCIQSPSGQGKHKPTCTCLACETLKRRSKTLMMRKKKNQSESEAAAPQNDQTNHSGEADTSGDASRQDTSNSTDEVSLNGGQKEAVEPSAAGQLDLNCHPDHEDM* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2963 776 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 591 776 - -
Tpr4g2963 776 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 3 590 - -
Tpr4g2963 776 MobiDBLite consensus disorder prediction 713 750 - -
Tpr4g2963 776 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 591 776 - -
Tpr4g2963 776 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 590 - -
Tpr4g2963 776 SUPERFAMILY DNA-binding pseudobarrel domain 320 422 IPR015300 -
Tpr4g2963 776 Gene3D - 301 427 IPR015300 -
Tpr4g2963 776 MobiDBLite consensus disorder prediction 427 448 - -
Tpr4g2963 776 MobiDBLite consensus disorder prediction 703 776 - -
Tpr4g2963 776 SMART B3_2 323 424 IPR003340 GO:0003677
Tpr4g2963 776 MobiDBLite consensus disorder prediction 595 619 - -
Tpr4g2963 776 CDD B3_DNA 321 422 IPR003340 GO:0003677
Tpr4g2963 776 Pfam B3 DNA binding domain 323 423 IPR003340 GO:0003677
Tpr4g2963 776 ProSiteProfiles B3 DNA-binding domain profile. 323 424 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2963 Tpr-Chr4 33867345 33873831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2963 3 707 B3 DNA Binding Superfamily AT4G32010 41.477 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr4g2963 B3 4.1e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2963 - - lang:109356710 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3593 3 39808647 39815766 Tpr4g2963 4 33867345 33873831 PCT