Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2961 ATGCAACATCAATCTTCAAACCCTAATCCCAATTCCAATCCCAATCCTCACAATGCAAACACCGCATCCCAATTACCACCACCAGTGCCGCCACCATCCACGACGGCGACAACCTCCGCCGGCAAATCCTCTCTATTCGCTCACTCTAGCGGCAATGCCAGTTCCCATCACCGGCGAGCTCACTCGGAAGTCAATTTCCGGTTACCAGATGACATGATGGACTTATCACCGTCCGATCCATTCACCGGCGGATCGTCAACGGCGAGCTTAGATGAGATCGGATCCGAAGACGACCTATTCTCGACGTACATTGATATGGATAAGTTGGGAGACGCCGGAGCAGATCTGGTTGGAAATGATGTGCCGGAGAAGAATCCGGTGAGGCCGAGGCATAGGCATAGTAGTTCGGTTGATGGTTCTTCCTCGTTTGGGGAGATTATGGATGGGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAACTTTGGTCTATTGATCCAAAGCGTGCAAAGAGAATACTTGCAAATCGACAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCCCGTTATATACATGAACTAGAGCGCAAAGTTCAGACCCTGCAGACTGAAGCTACAACTCTTTCTGCCCAACTGACACTATACCAGAGAGACACAACAGGTCTGAGTACTGAAAATACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAAGCACATCTTCGTGATGCTCTTAATGATGCACTGAAGAAAGAAGTTGAGAGGCTGAAAGTTGCTACTGGGGATATAATGAGCCACACTCAATCTTTTAATCTTGGTATGCACCAGATGCAATTTACAGAATCAAATTATGCTCCAATTCCACCACAACCAGGTCCTTCTAATCACCGGAACACCCAGTTACCACTATTTGGTCACTCCCCATCTAGCATGCAATCTCATCAACTGCACCAAACAAATTCTCTTTCATTTTCAGAATTATTGCAAAATGATCAGATTGGTCGATTTCAGGGACTTGACATTAGTAGTAAAGGAACAACTGTTGTAAAGTCTGAAGACCCTTCTCTTTCTGCAAGTGAGAGTAGCACTACATATTGA 1098 0.4608 MQHQSSNPNPNSNPNPHNANTASQLPPPVPPPSTTATTSAGKSSLFAHSSGNASSHHRRAHSEVNFRLPDDMMDLSPSDPFTGGSSTASLDEIGSEDDLFSTYIDMDKLGDAGADLVGNDVPEKNPVRPRHRHSSSVDGSSSFGEIMDGKKAMPPDKLAELWSIDPKRAKRILANRQSAARSKERKARYIHELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAHLRDALNDALKKEVERLKVATGDIMSHTQSFNLGMHQMQFTESNYAPIPPQPGPSNHRNTQLPLFGHSPSSMQSHQLHQTNSLSFSELLQNDQIGRFQGLDISSKGTTVVKSEDPSLSASESSTTY* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2961 365 MobiDBLite consensus disorder prediction 35 53 - -
Tpr4g2961 365 SMART brlzneu 163 227 IPR004827 GO:0003700|GO:0006355
Tpr4g2961 365 MobiDBLite consensus disorder prediction 346 365 - -
Tpr4g2961 365 MobiDBLite consensus disorder prediction 282 318 - -
Tpr4g2961 365 MobiDBLite consensus disorder prediction 1 20 - -
Tpr4g2961 365 SUPERFAMILY Leucine zipper domain 167 218 IPR046347 GO:0003700|GO:0006355
Tpr4g2961 365 MobiDBLite consensus disorder prediction 296 318 - -
Tpr4g2961 365 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 165 228 IPR004827 GO:0003700|GO:0006355
Tpr4g2961 365 MobiDBLite consensus disorder prediction 1 92 - -
Tpr4g2961 365 CDD bZIP_plant_RF2 168 217 IPR044759 GO:0003700|GO:0006355
Tpr4g2961 365 Pfam bZIP transcription factor 167 222 IPR004827 GO:0003700|GO:0006355
Tpr4g2961 365 Coils Coil 183 210 - -
Tpr4g2961 365 PANTHER ATBZIP TRANSCRIPTION FACTOR 6 362 - -
Tpr4g2961 365 MobiDBLite consensus disorder prediction 122 150 - -
Tpr4g2961 365 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 362 - -
Tpr4g2961 365 Gene3D - 166 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2961 Tpr-Chr4 33853548 33856519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2961 12 364 bZIP Transcription Factor Family AT2G40620 49.630 4.85e-100 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr4g2961 bZIP_1 3.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2961 - - vra:106763153 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2961 4 33853548 33856519 Tpr4g2961 4 33853548 33856519 ECH