Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2954 ATGGGAAACAATAAGTTCAAATTTTCAGATATGATACCAAATGCATGGTTTTACAAGCTTAAAGATATGAGCAAATCATCAAGGAAAAGAAACGGTTCACAATCTCATCATGTTATGAAGAACAAAGTAATGACTTCACCAACAACATCTCAAAGGTCACAACAATATTCAAGGTATTCTTCACAACATTTCTCAAATGAACAAACAAAAGCTTATAATAAAATATTGAACTCACCAATTCACACCAAAGATTTGAACCTTCCATTCAATGATTCACCAAGAAAGTCTTCAAAGAGAAGGACTAGAAGAAAAACTATTTACAAGCCTTCTCAACATGATGATGATGATGATTTGTCTTCAATTGAAAATTCTTCTTCCGAGTCTTATCATAATCAATGTGTTTCTTCTGAATCTGAATTTTGTGATAGCTTTTCGGTTCCGGATTTGCTTAATTGTAGTTGTAGAGTTAGCTCTTCAACTAATGATATAATCATAGACATGAACAATGAATCTTTTCAAGGAAATTCTAAAAATTTAGATGGTCTTGATGCATTTTCACAACATGGTTTAGCTCCAATATTGACAAAGCAAGTTAAGTTTGATGATAAGATTGAATCTCGAAGTTCAACCGAATCCGAAGAAAATATTAATAGAACTCAAAGAAGGAGGAAAAAAAGTCAAATAGGTAAAAAAGCTTCTCCAAATTCTCAAGGTATTAAGCTTAGAGTGAATTCTCCAAAACTTGTTAACAAAAAAATTCAAGCTTATGGAAGAAAGAGTGTTTCATCATCATTATCAAGTGGAAGCAAAGTTTCAAGGAATGATGGAGGGTTTGTAGATGGATTTGCAGTTGTTAAGTCTTCAATTGATCCAATAAGTGATTTTAAGGAATCAATGGTGGAAATGATTGTGGAGAATAATATAAGAGGATCAAAGGATTTGGAGAATTTACTTGCTTGTTATCTTTCTCTTAATTCAAGTGAATATCATGATGTTATTGTTAAAGCTTTTGAGCAAATTTGGTATGACATGGCTCAACTTAGAATGTAA 1050 0.3162 MGNNKFKFSDMIPNAWFYKLKDMSKSSRKRNGSQSHHVMKNKVMTSPTTSQRSQQYSRYSSQHFSNEQTKAYNKILNSPIHTKDLNLPFNDSPRKSSKRRTRRKTIYKPSQHDDDDDLSSIENSSSESYHNQCVSSESEFCDSFSVPDLLNCSCRVSSSTNDIIIDMNNESFQGNSKNLDGLDAFSQHGLAPILTKQVKFDDKIESRSSTESEENINRTQRRRKKSQIGKKASPNSQGIKLRVNSPKLVNKKIQAYGRKSVSSSLSSGSKVSRNDGGFVDGFAVVKSSIDPISDFKESMVEMIVENNIRGSKDLENLLACYLSLNSSEYHDVIVKAFEQIWYDMAQLRM* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2954 349 MobiDBLite consensus disorder prediction 83 123 - -
Tpr4g2954 349 MobiDBLite consensus disorder prediction 202 241 - -
Tpr4g2954 349 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 282 344 IPR006458 -
Tpr4g2954 349 MobiDBLite consensus disorder prediction 202 221 - -
Tpr4g2954 349 Pfam Transcriptional repressor, ovate 288 344 IPR006458 -
Tpr4g2954 349 MobiDBLite consensus disorder prediction 24 64 - -
Tpr4g2954 349 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Tpr4g2954 349 PANTHER TRANSCRIPTION REPRESSOR OFP3 3 348 - -
Tpr4g2954 349 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 348 IPR038933 GO:0045892
Tpr4g2954 349 MobiDBLite consensus disorder prediction 37 64 - -
Tpr4g2954 349 ProSiteProfiles OVATE domain profile. 284 343 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2954 Tpr-Chr4 33715559 33716958 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr4g2954 Ovate 7.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2954 - - cam:101489571 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2954 4 33715559 33716958 Tpr4g2954 4 33715559 33716958 ECH