Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2945 ATGGAGAATAGATCAAAATCAAAAGTCTTGATGAAAAGATATGAATTAGGAAGATTACTAGGCAAAGGAACATTTGGAAAAGTTTACTATGGAAGAAGTATAACAACTAACCAAAGTGTAGCTATTAAAATGATTGACAAGGATAAGGTTGTAAAAAATTACCAAGCGGATAGCATAAAAAGGGAAATATCGGTCATGAGACTCGTAAAACATCCTAATATCATACAGCTTTTTGAGGTCATGGCTACAAAGAGTAAGATTTACATTGTTATTGAATATGCTAAAGGCGGCGAGCTTTTCAAGAAACTAGCAAAAGGAAAGTTCAAAGAAGGTGTTGCACACAAATATTTCAAGCAGTTAATTAGTGCAGTTGATTATTGTCATAGTAGAGGTGTATACCATAGAGACATAAAGCCAGAAAACATTCTATTAGATGAGAATAAGAATCTGAAAGTATCAGATTTTGGTTTAAGTGCTTCTGCTGAATCAAAAAGGCACGACGGTTTATTGCATACAACTTGTGGAACACCTGCTTATCTTGCTCCTGAAGTCATCAAACGGAAGGGTTATGATGGTTCCAAAGCTGATATTTGGTCTTGTGGAGTTGTTCTTTTTGTTTTGCTTGCTGGTTATGTACCTTTTAATGACATCAATTTGATGGACATGTATAGAAAGATAAGTAATGCAGATTTTAAGTGTCCTAATTGGTTTCCGAGAAATGTTAGGAAACTGTTGTGTAAGATGTTGGATCCAAATCCTGACACTAGGATATGTATAGATAACATTAAGCAATGTTCTTGGTTTAAGCATGGACCAAATGGTAGACAGAAAAAACAAGTGGAAAACAATACTATCTCTTCCTTGGCTACAAACTCTGTAGCATCGACACATCTGGTTGAAGGTGTGTCGGTGTCGGTGTCCGACACCGACACGACACCTACACATGTGACAAATCATTCTGATGGAAGGGACGAAACTGAAAAGCAAGAGTCGGTTGTACCTGTGAGCATAAATGCCTTTGATATTATCTCTCTTTCAACTGGTTTTAATCTATGTGGATTCTTTGAAGACAGTTTTAAGAAAAAGGAAGCTAGGTTTACTTCGAGACAACCCGCATCGGTCATTATTTCGAGGATGGAAGAGATTGCTAAGAGACTGAAGATGAAAATAAAGAAAAGGGCTGCTGGTTTATTGAAATTAGAGGGAGTTGATGAAGGTAGGAAAGGGATCTTGTGTATTGATGCTGAGATTTTTGAGGTTACTCCATTTTTTCATTTGGTTGAAGTGAAAAAATCAAATGGAGATAGATTGGAATATCAGAAAATATTGAATGATGATATTAGGCCTGCTCTTCAAGATATTGTTTGGGTTTGGCAAGGTGAATTACAAGAACAATCTCAACAGTACGAGCAGCAGTAG 1419 0.3643 MENRSKSKVLMKRYELGRLLGKGTFGKVYYGRSITTNQSVAIKMIDKDKVVKNYQADSIKREISVMRLVKHPNIIQLFEVMATKSKIYIVIEYAKGGELFKKLAKGKFKEGVAHKYFKQLISAVDYCHSRGVYHRDIKPENILLDENKNLKVSDFGLSASAESKRHDGLLHTTCGTPAYLAPEVIKRKGYDGSKADIWSCGVVLFVLLAGYVPFNDINLMDMYRKISNADFKCPNWFPRNVRKLLCKMLDPNPDTRICIDNIKQCSWFKHGPNGRQKKQVENNTISSLATNSVASTHLVEGVSVSVSDTDTTPTHVTNHSDGRDETEKQESVVPVSINAFDIISLSTGFNLCGFFEDSFKKKEARFTSRQPASVIISRMEEIAKRLKMKIKKRAAGLLKLEGVDEGRKGILCIDAEIFEVTPFFHLVEVKKSNGDRLEYQKILNDDIRPALQDIVWVWQGELQEQSQQYEQQ* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2945 472 ProSiteProfiles Protein kinase domain profile. 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2945 472 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Tpr4g2945 472 SMART serkin_6 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2945 472 ProSiteProfiles NAF domain profile. 332 356 IPR018451 GO:0007165
Tpr4g2945 472 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 470 - -
Tpr4g2945 472 SUPERFAMILY Protein kinase-like (PK-like) 10 302 IPR011009 -
Tpr4g2945 472 Pfam NAF domain 334 392 IPR004041 GO:0007165
Tpr4g2945 472 Pfam Protein kinase domain 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2945 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Tpr4g2945 472 MobiDBLite consensus disorder prediction 309 328 - -
Tpr4g2945 472 Gene3D Transferase(Phosphotransferase) domain 1 4 334 - -
Tpr4g2945 472 PANTHER - 6 470 - -
Tpr4g2945 472 CDD CIPK_C 338 452 - -
Tpr4g2945 472 Gene3D Kinase associated domain 1, KA1 335 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2945 Tpr-Chr4 33585245 33589283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2945 1 464 CBL-interacting serine-threonine protein kinases AT5G58380 63.519 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr4g2945 Pkinase 4.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2945 - K07198 gmx:100779316 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2945 4 33585245 33589283 Tpr4g2945 4 33585245 33589283 ECH
Tpr4g2945 4 33585245 33589283 Tpr3g3631 3 40375483 40378615 ECH
Tpr6g1815 6 19558539 19561958 Tpr4g2945 4 33585245 33589283 ECH
Tpr4g1042 4 10096076 10099763 Tpr4g2945 4 33585245 33589283 ECH