Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2938 ATGGAATGTTTGGTTGAAAGCCTCTCAAGATTAGGGTTCAAGAAACTCAGCGTTGAAGACCTTCAGATGTTGTCATGGAAAGAAATCGAAGATGAGATTGAAAGATGGATCAAAGCTTCCAACTTGGCTTTGAAGATATTGTTACCCGCTGAATGCAAACCCTGTGATTGCGTTTTCTTTGGGTTCTTCTCCACTGCTGATTTATCGTTTACGGATGTTTGTAGGGAATCCACACTTCAGCTGCTCAATTTCAGGGATGCTATTGCTATTGAAAGCCAATCGCCTGAACGGCTGCCTAGAGTCCTCAACATGTTTGAAACAATGCGTGATCACCTAATTCCAGAGATTGAGTCTATGTTCCGTGATCAATCCAGTGGGTTGCTGCGAAGCAAAGCAACCACAGTTTGGAAGATATTGGGGGAAGCGATCAGAGTGAATCTCGAAGGTGAACTTCACCCGATCACCAGTTACATGATAAATTATCTCTGTGCTGCTAGTCGGTCACGGAAGACCCTGGAGCAAGTGTTTGAAGGAGATTATGGGGATCCATTGAAGGAATATCCTGAAATTGAGGATAGAGTTCATTCCTATTCCAATCTCTCAGGGCAGATGGGTTTGATTATTTGGCTATTAGAGAGCAAGTTGATAGCCGAATCCAAACTCCATAACAGGCTGACTGATTTGTCTCTACGATTCTTGATCAGAAACGTTGAATACATTGTTCAAAAGGCTAAAGAGTGTGAATTAGGAACTATTTTAGGAGATGATTGGTTCAAAAATCAGGCTACCCAATTTAACCAAGAAATAAAACAGAAAGAAGAGGAACTTCTATCAAAAAAGAAAACACAAAAAGAAGAGGAAATTATACGAATCTTGGGGCCAAATCAGAGTTTTGGTCGTGGGAGTAGTGATCTGATGGGTAGGCCACCACTAATTAGCAATGTGATGAGCCGAAGACAAGAGCGATCAGACAATGCTGATTAG 984 0.4167 MECLVESLSRLGFKKLSVEDLQMLSWKEIEDEIERWIKASNLALKILLPAECKPCDCVFFGFFSTADLSFTDVCRESTLQLLNFRDAIAIESQSPERLPRVLNMFETMRDHLIPEIESMFRDQSSGLLRSKATTVWKILGEAIRVNLEGELHPITSYMINYLCAASRSRKTLEQVFEGDYGDPLKEYPEIEDRVHSYSNLSGQMGLIIWLLESKLIAESKLHNRLTDLSLRFLIRNVEYIVQKAKECELGTILGDDWFKNQATQFNQEIKQKEEELLSKKKTQKEEEIIRILGPNQSFGRGSSDLMGRPPLISNVMSRRQERSDNAD* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2938 327 MobiDBLite consensus disorder prediction 299 327 - -
Tpr4g2938 327 SUPERFAMILY Cullin repeat-like 2 272 IPR016159 -
Tpr4g2938 327 Coils Coil 262 286 - -
Tpr4g2938 327 Pfam Exo70 exocyst complex subunit 34 272 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2938 327 Gene3D Exocyst complex component Exo70 1 291 - -
Tpr4g2938 327 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 270 IPR004140 GO:0000145|GO:0006887
Tpr4g2938 327 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 2 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2938 Tpr-Chr4 33509556 33510582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2938 2 267 EXO70 exocyst subunit family AT5G58430 52.297 2.70e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2938 K07195 - gmx:100803694 279.256