Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2937 ATGAAGGGAAAACCAGATGCATATAGTCTACTTTCATGTGCTGCTTTTGCTATCATGTCACTGAGTTTGTCGCGGGAAACTCAGTCCGGATTCAAAATCGATCTTATATATTTTTTCCTCGGAAGTCTAATTCTGCAACTCATGAAGATTAAATTGCTATTATGCATTCCAGGAGTAGGTTTCGGTTACTTAATTTTTATTCTTCGTTCTCATTTCTCTTCTATAAATGATGCAATTCAAGCCGAGTCACATTCACAACAATTGGTCAGTACTATTGATAATGACGATCCCACTAGTCTTCAAGATGAAAATCTGAATGTTATTGTCGATCCACATTCAACACAACTGGCCAGTACTAGTACTGCTGATATTGGAGGTAGTATGCTGGAAAAAATTAGTGATTGTGTGAAGGCACTTCGGCAAGAAAATTCAACTCTCATGGAAATGCTTATGGAAAAGTTGAAAGATTACCTTAGTGACGATTCTGGATTTAATGTGTCTGACCCAGACTTCATGATCATGGCCTTGTCAACTGAAACAATCGACAACCTTCACAAAACAGCCAAGTTGATGGTTCGTGCTGGGTTAAAGTGTGAACTCTCCGACGTATATACCAGTTCCCGGAGGGAATATTTGGTCGAAAGCCTCTCAAGATTAGGGTTCAAGAAACTCAGCATTGAAGACCTTCAGATGTTGTCATGGAAAGAAATTGAAGATGAGATTAAAAGATGGATCAAAGCTTCCAACGTGGCTTTGAAGATATTGTTACCCGCCGAACACAAACTCTTCGATCAGGTTTTCTTTGGATTCTCCTCCACTGCTGATTTATCGTTTATGGATGTTTGCAGGGAATCCACACTTCAGCTGCTGGATTCCGCTGATACTATCGCCATAGGAAGTCGATCACCTGAGCGGTTGTTTAGAGTCCTCGACATGTTTGAAACAATGCGTGACCTAATAATTCCAGAGTTTGAGTCTTTGTTCCCTTATCAATACAGTGGATCCCTGCAAATCGAAGCAATGGCAACTTGCAAGGGATTGGGGGAAGCAATCAGAGGCATTTTCATAGAGTTTGGGAATCAGATTTCGCAAGATTCAACGGAGGAAATATATCAGAAAGATGAACTTCCCTCGATCACCAGTTACGTGATGGATCATCTCTGTGCTGCTAGTCGGTCACGGAAGACCTTGGAGCAAGTGTTCGACGGAGATTATGGGGATCCATTGAAGGAATATCCTAAAATTGAGGATAGAGTGCATTCCTGTTCCGATCTCTCAGTACAGATGGGTTTGATTATGAAGCTATTATGGAACAAGTTGGCCGCTATAGCCAAATACCATGAAAATGTATTGATATATAACAAGTTACCTCTGTGGCACTCTGGTTTCTTGATGACAAACAGGAAGTACATTGCTCAAAAAGCTGAAGATAGTGAATTAGGAGCTATTTTAGGAGATAACTGGTTCATCAATAATCTACCTGGCCTATTTCCCTCACATCCCATTGATTTAAATGAGTTGGCAGACATAAACGTTTTTCTGCCAGGTCAAAAAGTTGCTTATAAGCTTAAAAGAACATAA 1581 0.4029 MKGKPDAYSLLSCAAFAIMSLSLSRETQSGFKIDLIYFFLGSLILQLMKIKLLLCIPGVGFGYLIFILRSHFSSINDAIQAESHSQQLVSTIDNDDPTSLQDENLNVIVDPHSTQLASTSTADIGGSMLEKISDCVKALRQENSTLMEMLMEKLKDYLSDDSGFNVSDPDFMIMALSTETIDNLHKTAKLMVRAGLKCELSDVYTSSRREYLVESLSRLGFKKLSIEDLQMLSWKEIEDEIKRWIKASNVALKILLPAEHKLFDQVFFGFSSTADLSFMDVCRESTLQLLDSADTIAIGSRSPERLFRVLDMFETMRDLIIPEFESLFPYQYSGSLQIEAMATCKGLGEAIRGIFIEFGNQISQDSTEEIYQKDELPSITSYVMDHLCAASRSRKTLEQVFDGDYGDPLKEYPKIEDRVHSCSDLSVQMGLIMKLLWNKLAAIAKYHENVLIYNKLPLWHSGFLMTNRKYIAQKAEDSELGAILGDNWFINNLPGLFPSHPIDLNELADINVFLPGQKVAYKLKRT* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2937 526 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 1 489 - -
Tpr4g2937 526 SUPERFAMILY Cullin repeat-like 142 489 IPR016159 -
Tpr4g2937 526 Gene3D Exocyst complex component Exo70 124 493 - -
Tpr4g2937 526 Pfam Exo70 exocyst complex subunit 242 489 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2937 526 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 489 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2937 Tpr-Chr4 33506735 33508962 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2937 166 476 EXO70 exocyst subunit family AT5G58430 52.885 1.35e-93 296