Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2934 ATGATGAATACTCTAATCCAAATTTGGAGATGGGTTATGCAGCCAAAGGTGTGGAGATTTGTATGTTCTGTTTCAGCTGTTATTGGACTGCTCTGTTATGGTCTCAGCTCTTCCTTCAACTATCTCTTTGGACATTGGAATGTCTTGAAGATTGTTCTATATAGCCTTTTCAGCTTCATCATCGGCTTCTTGAATTTATTTGCAAACAAATGGCAACACTCAACAAGTCATTGGATTAAAGCTCACGCAGCTTTTTTGGTATTAACAATCACTACACTCTACTCATTCTTCTTCGATAAATTAATGAAGGGAAAACCAGATGCATATAGTCTACTTTCATGTGCTGCTTTTGCTATCATGTCACTGAGTTTGTCGCGGGAAACTCAGTCCGGATTCAAAATCGATCTTATGTATTTTTTCCTTGGAAGTCTAATTCTGCAACTGATGAAGATTAAATTGATATTATTCATTCCAGGAGCAGGTTTCGGTTACTTAATTGTTATTCTTCGTTCTTATTTCTCTTCTATAAATGATGCAATTCAAGCTGAGTCACATTCACATTCACTACAATTGGCCAGTATTACTGATAATGACGATCCCACTAGTCTTCAAGATGAAAATCTGAATGTTATTGTCGATCCACATTCAACACAACTGACCAGTACTGATATTGGAAGTAGTATGCTGGAACAACTCAGTGATTATGTGAAAGCACTTCAGCAAGAAAATTCAACTCTCATCGAAATGCTTATGGAGAACTTGAAGGATTACCTAAGTGATGATTCTGCATTTAGTGGATTTAATGTGTCCGAGGACACGGACTTCATGATCATGGCGCTGCCAACTGAAACAATCGACAACATTCACAAAACAGCCAAGTTGATGGTTAGTGCCGGTTTTAAGAGGGAATTCTCGGACGTGTACAGCAGTTCCCGAAGGGATTGTTTGGTCGAAAGCCTCTCAAGATTAGGGTTCAAGAAACTCACCATTGAAGACCGTCGGATGTTGTCATGGAAAGAAATCGAAAACAAGATTGTAAGATGGATCAAAGCTTCCAACGTGGCTTTGAAGATATTGTTACCCACTGAAAGGAAACTCTGCGATCGGGCTTTCTTTGGGTTCTCCTCCACTGCTGATTTGTCATTTATGGGTGTTTGTTGTGAATCCGCACTTCAGCTGCTGAATTTCGCGGATGTTATTGCCATTGGAAGCGGATCACCAGAGCAGTTGCATAGAGTCCTCAAGGTGTTCGAAACAATGCGTGACCTAATAATTCCAGAGTTTGAGTCTTTGTTCCGTGATCAATACAGTGCATCCCTGCAAAAGGAAGCAATCACAGTTTGGAAGAGATTGGGGGAAGGGATCAGAGGCATTTTCACGGAGTTTACGAATCTGATTCAGCAAATTTCAGCTGAGGAAGTAAATCTCGATGCGGAAATTCACCCGATCACCATTCACGTGATGAATTATCTCTGTGCTGCTAGTCAGTCACGGAAGACCCTGGAGCAAGTGTTCGAAGGAGATTATGGGGATCTATTGAAGGAATATCCTAAAATTGAGGATAGAGTGCAATCCTCTTCCAATGTCTCAGGGCAGATGGGTTTGATTATGGAGCTATTAGAGAGCAAGTTGATAGCCGAATCCAAACTCCATAGCAGGCTGACTGATTTGTCTCTACGATTCTTGATCAGAAACGTTGACTACATTGTTCAAAAGGCTAAAGAGTGTGAATTAGGAACCATTTTAGGAGATGATTGGTTCAAAAATCAGGCTACCCAATTTAACCAAGAGATAAAACAAAAAGAAGAGGAACTGCTGTCAAAAAAGCTAAAACAAAAACAAGACGAACTGCTGTTGAAAAAGCAAAAACAAAAAGAAGAAGTACTGCTGTCAACCGGTGTTAAGCTACCACAAATGGCCCAAGTGTTTAGAAGAAGAGGTTGA 1944 0.4028 MMNTLIQIWRWVMQPKVWRFVCSVSAVIGLLCYGLSSSFNYLFGHWNVLKIVLYSLFSFIIGFLNLFANKWQHSTSHWIKAHAAFLVLTITTLYSFFFDKLMKGKPDAYSLLSCAAFAIMSLSLSRETQSGFKIDLMYFFLGSLILQLMKIKLILFIPGAGFGYLIVILRSYFSSINDAIQAESHSHSLQLASITDNDDPTSLQDENLNVIVDPHSTQLTSTDIGSSMLEQLSDYVKALQQENSTLIEMLMENLKDYLSDDSAFSGFNVSEDTDFMIMALPTETIDNIHKTAKLMVSAGFKREFSDVYSSSRRDCLVESLSRLGFKKLTIEDRRMLSWKEIENKIVRWIKASNVALKILLPTERKLCDRAFFGFSSTADLSFMGVCCESALQLLNFADVIAIGSGSPEQLHRVLKVFETMRDLIIPEFESLFRDQYSASLQKEAITVWKRLGEGIRGIFTEFTNLIQQISAEEVNLDAEIHPITIHVMNYLCAASQSRKTLEQVFEGDYGDLLKEYPKIEDRVQSSSNVSGQMGLIMELLESKLIAESKLHSRLTDLSLRFLIRNVDYIVQKAKECELGTILGDDWFKNQATQFNQEIKQKEEELLSKKLKQKQDELLLKKQKQKEEVLLSTGVKLPQMAQVFRRRG* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2934 647 Pfam Exo70 exocyst complex subunit 347 602 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2934 647 Gene3D Exocyst complex component Exo70 221 645 - -
Tpr4g2934 647 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 24 600 - -
Tpr4g2934 647 Coils Coil 591 627 - -
Tpr4g2934 647 Coils Coil 229 249 - -
Tpr4g2934 647 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 600 IPR004140 GO:0000145|GO:0006887
Tpr4g2934 647 SUPERFAMILY Cullin repeat-like 228 602 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2934 Tpr-Chr4 33495317 33498737 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2934 272 596 EXO70 exocyst subunit family AT5G58430 54.462 2.22e-100 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2934 - K07195 cam:101500706 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2934 4 33495317 33498737 Tpr4g2934 4 33495317 33498737 ECH