Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2929 ATGGATTCTCGTATCCAATTTTATCTTGTGATTTTTATGGTCACTTTAGCAACAATTTTGAGCCCTACACTAGCAAAGCTCACTCCTAATTATTATGATAGAGTTTGTCCTAAGGCATTGCCAATCATAAAGTCAATTGTTAAGCAAGCAATTTATCGCGAACCACGCATTGGAGCATCATTACTACGTTTGCATTTTCATGATTGCTTTGTTAATGGGTGTGATGCATCAGTTCTACTGGATGATACCCCTACCTTCCTGGGTGAGAAGACTGCATTTCCAAATAATAATTCAATTAGAGGTTTTGAGGTTGTTGATCAAATTAAAGCCGCCGTTACCAAAGCTTGCAAACGCGATGTTGTATCATGTGCAGATATTTTAGCTATAGCAGCTAGAGATTCTGTAACCATACTTGGTGGAAACCAATATTGGTACCAAGTGTTACTAGGAAGAAGAGATGCAAGAAATGCAAGTTGGGCTTCAGCAAATGCAAATCTTCCACCACCATTTTTCAACTTGTCACAACTCATCACAAGTTTCAAATCTCATGGACTTAACCTTAAAGACTTAGTTGTTCTATCTGGTGCTCACACAATTGGATTTGCCAAATGCAGTTCATTTAGGGACAGAATCTTCAATGACACCAACATAGACATCAACTTCGCGGCCAATTTACGTAAAACATGTCCTCAAACCGGTGGCAACACCAACTTAGCACCATTTGATTCTACTCCTAAAAAAGTTGACACAACATACTATAAGAGTTTGTTGTACAAAAAGGGTTTACTTCATTCTGATCAAGAGCTTTACAAAGGTGATGGTTCTCAAAGTGATAGATATGTGAAGCTATATAGTAAAAATTCTTATGCTTTTGCTAAAGATTTTGGAGTTTCTATGATTAAGATGGGAAACTTGAAGCCTCTTACTGGGAGAAAGGGTGAGATAAGGTGCAATTGCAGAAAAGTCAACAATTATTGA 978 0.3742 MDSRIQFYLVIFMVTLATILSPTLAKLTPNYYDRVCPKALPIIKSIVKQAIYREPRIGASLLRLHFHDCFVNGCDASVLLDDTPTFLGEKTAFPNNNSIRGFEVVDQIKAAVTKACKRDVVSCADILAIAARDSVTILGGNQYWYQVLLGRRDARNASWASANANLPPPFFNLSQLITSFKSHGLNLKDLVVLSGAHTIGFAKCSSFRDRIFNDTNIDINFAANLRKTCPQTGGNTNLAPFDSTPKKVDTTYYKSLLYKKGLLHSDQELYKGDGSQSDRYVKLYSKNSYAFAKDFGVSMIKMGNLKPLTGRKGEIRCNCRKVNNY* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2929 325 Gene3D Peroxidase, domain 2 167 302 - -
Tpr4g2929 325 PANTHER PEROXIDASE 72-RELATED 6 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 Gene3D - 30 323 - -
Tpr4g2929 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Tpr4g2929 325 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Tpr4g2929 325 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Tpr4g2929 325 PANTHER CATIONIC PEROXIDASE 6 323 - -
Tpr4g2929 325 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2929 325 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2929 Tpr-Chr4 33384499 33386316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2929 25 323 Peroxidase AT5G05340 54.636 7.12e-114 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2929 K00430 - gmx:100810852 474.552