Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2928 ATGACACTCATACTCATCCAAATTCAGAGGTCGCTGATGCATACAAAGGTATGGAGATTTGTTGGGTTTGCTTCAGCTGTTGTTGGACTTGTTTGTTATGCTCTAAGCTCTTCCTTCAACCATCTTTTTGGAAACTGGACTTTGTTGAAGATAATTCTTTACACTGTTTTCAGTTTCATTATCTGCCTTGTGATTTTGTATACAAATATATGGAGCCACTCGAGAAGTCTTCGGTTCAAAGCTCATACAGCGTTTTTGGTATTGACAATCACCTCTGTCTATTCCTTTTACTTCGATAAAGTGATGAATGGAAAACCAGATGTATATAGCTTAATTTCATGTGCTGCCTTTGCTATCATGTTGCTGAGTTTGTCGCGGCAAACTCAGAGCGGATTCGAAGTGGATCTTCTTTACTTTTTTCTCGGATGTCTAATTGTGTTACTCATGAAGGTTAGATTGCAGTTATTCATTCTTGGAGCAGGTTTGAGTTATTCCCTTATCATTCTTCGTTCTTTCTTTTCTTCTACACAAGATATTGTATACTCTGAACTAGAACATGAAAGTTCAGTAATTATTGAAGTCAATTCGCTGCAACAACTAGCCAGTACTGATATTGCTAGTACAATGGAACAACTAAGGTCTTATCTTAACACTCTCCAGCAGAAAAATTTGAATCTTGTGGATATACTGTTGAAGCATGTGAATGAATATGGTGACTCTGAATTGATGTCGTTCGGCCCCAACTTCATGATCAATGAGTTGCAGCCAGAATTGATCAACTACCTTCATGAAACCGCGAAGTTGATGGTTCGCGCTGGATTTGAGGAAGAGTTTTCTAAGGTATACATCAATTGTAGAAGGAAGTGTTTGGAGGAGTGCCTAATAAATAGATTATTTGGCTTGCAGAAGATTAACCTCAAGAATGAACATCGACAAGTGAGATATGTAGATACTGTGATTAAAAGGTGGATCACAGCATCCGAAATTGCTCTTAAGATTCTATTTCCCTTCGAACAACGACTCTGTGATCATGTCTTTTCAGGTTTCACCTCCTCCGCTACTCGTTGTTTCACCGAGGTTTTCCACGGAACAACATTTCAGCTTCTGAATTTCGCTGATGAAGTTGCTCATGGAAGCCCTTCAATTTGGCGTTTATTCAAAATGCTCGCAATCTTTGAGACATTGCATTATCTGATACCGAAATTCCAGTTGTGTCCTGATTCGTTGGTGAACGAAGCAGCAGTTACAGTCCAAAACAGATTAGGCATAGCAATCAGTGAACTTTTCGTGAAACTGAACTATCTTATTTTTCGTGTCCCAGCAGCTAAGAAAGTTGCTCCGTCTGATGGCCGAGTTCATCCAATGACGGTCCAGATAATTAGTTACCTTGCTTCTGCTTGTAGGTCTCGTCATACACTAGAACAAATTTTGCAGGAATATCCCAAGGTGAATAATGGAGTAGTAGTGAAAGTTTCTTTTATAGCACACATGCAGTGGATATTGGATATACTAGAGAAAAGATTGAAAGCCAAGTCTAAAGACTACAAAAACCCTGCTTTGGGCTATCTTTTCATGATGAATAACAGGAGTCACATAGAAGCTATAATTAAAACTTGGGATTTGGAAACCATTTTCGGCGATGATTGGTTCAAAAAATATCAAGCAAAAATACAACAAGACTTTGATCTTTATCAAAGAAACTCATGGAACAAGGTGTTGGAGTTTTTGAAGTTGGACAACAATGACTTTGTGGCACCCGATGATAATGTTACGTCAGAGTTATTGAAAGAGAAGCTAAATCTGTTCAACAAGCATTTTGATGAGATGTATAGAGTTCAGTCTACTTGGTCTGTTTATGATAAGAAGCTGAGAGAAGAAATAATAATATCAGTGGGAAATACTTTGTTGCCTGTATATGGAATCTTCATTGGGAGGTTCCGGGATTGTTTTGGTGTTCATGCTAATGAATATATTGAATATGGAATGTTTGAGATTCAAGATCGACTCAACAATTTGTTTCTGGGAAAAAGATAG 2034 0.38 MTLILIQIQRSLMHTKVWRFVGFASAVVGLVCYALSSSFNHLFGNWTLLKIILYTVFSFIICLVILYTNIWSHSRSLRFKAHTAFLVLTITSVYSFYFDKVMNGKPDVYSLISCAAFAIMLLSLSRQTQSGFEVDLLYFFLGCLIVLLMKVRLQLFILGAGLSYSLIILRSFFSSTQDIVYSELEHESSVIIEVNSLQQLASTDIASTMEQLRSYLNTLQQKNLNLVDILLKHVNEYGDSELMSFGPNFMINELQPELINYLHETAKLMVRAGFEEEFSKVYINCRRKCLEECLINRLFGLQKINLKNEHRQVRYVDTVIKRWITASEIALKILFPFEQRLCDHVFSGFTSSATRCFTEVFHGTTFQLLNFADEVAHGSPSIWRLFKMLAIFETLHYLIPKFQLCPDSLVNEAAVTVQNRLGIAISELFVKLNYLIFRVPAAKKVAPSDGRVHPMTVQIISYLASACRSRHTLEQILQEYPKVNNGVVVKVSFIAHMQWILDILEKRLKAKSKDYKNPALGYLFMMNNRSHIEAIIKTWDLETIFGDDWFKKYQAKIQQDFDLYQRNSWNKVLEFLKLDNNDFVAPDDNVTSELLKEKLNLFNKHFDEMYRVQSTWSVYDKKLREEIIISVGNTLLPVYGIFIGRFRDCFGVHANEYIEYGMFEIQDRLNNLFLGKR* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2928 677 Gene3D Exocyst complex component Exo70 176 677 - -
Tpr4g2928 677 PANTHER EXOCYST COMPLEX PROTEIN EXO70 12 674 IPR004140 GO:0000145|GO:0006887
Tpr4g2928 677 Pfam Exo70 exocyst complex subunit 321 670 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2928 677 PANTHER PROTEIN, PUTATIVE-RELATED 12 674 - -
Tpr4g2928 677 SUPERFAMILY Cullin repeat-like 207 673 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2928 Tpr-Chr4 33380616 33383182 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2928 248 675 EXO70 exocyst subunit family AT5G58430 46.469 1.59e-111 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2928 - - mtr:MTR_5g074130 1052.74