Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2909 ATGACATCTTCATCAAGTAGTTTAGAAAACAATAACAATAACAATTTTTTAAACAATTTTACCTTCTCAACACACCCTTTTATGACTACTTCATCTTTCTCTGACCTTTTAGCTTCTACTATAGAAGAGAAATCAAGTGGTGAAAAAAATGGTTATGGTTATGGTGGTGGTGGAAATGGTGGGGGTGTGCCAAAATTTAAGTCTATACCCCCTCCTTCTTTGCCTTTGTCACCTCCTCCTGTTTCTCCTTCTTCTTACTTTTCTATTCCTCCTGGTTTGAGTCCTGCTGAGTTACTTGATTCACCTATTATGCTTAACTCTTCCAATATTTTGCCATCTCCTACAACTGGTTCTTTTGCTGGTCAAAGCTACAATTGGATGAACAATTCTGAAGAGAATCAGATTATTCCAAAGGAATCTGACAAAAGCTTCTCAAATTTCTCTTTTCAAACCCAACAAGGACCTGCTGTTACTGGATCCAATACTACTTTAAAATCATCAACAGTTGCAGTTGAACAGCAACCATGGAGTTATCAAGAAATCACAAATCAGAATGGTTTTTCACCTGAAAACAATATGATCCAAACTGAAAACAACTCTTCAATGCAGAGTTTTTCACCTGAAACCAATATGATCCAAGCTGAAAACAACAACATTTCAATGCAGAGTTTTTCTCCTGAGATTGCTAATGTTCAAACCATCACAAACAACAATGGATTCCAATTAGATCATAACACCAATTACACAATCTTAAGCAGAAGATCAGATGATGGATACAATTGGCGAAAATACGGACAAAAACAAGTTCGAGGAAGTGAAAATCCAAGAAGTTATTACAAATGCACTTACCCTAATTGTCCTACAAAGAAGAAAGTTGAGAGATCAATTGAAGGGCAAATTACTGAGATAGTTTATAAGGGTAATCATAATCATCCTAAACCTCAAGCTGGTTTTAGGAGAAACTCATCATCATCTTCTAATTCTCTTGTTATTGTTCCTGTTAATCCAAATGGTAATGAAATCCATGATCATTCATATGGTTCACATGGTAATGGACAAATGGATTCTGTTGCTACTCCTGAGAATTCATCGATATCAATCGGAGGAGATGATGATTTCGAGCAGAGTTCTCTTCAGAGGGCTAGATCTGTTGGTGCTGATGAATTTGTTGAAGAGGAACCTGAACCTAAAAGATGGAGAAATGAAAGTGAAAATCAGGGTATAGTCCTTGGACACAGGACAGTGAGAGAACCTAGAGTTGTTGTTCAGACAACAAGTGACATTGATATCCTTGATGATGGTTACAAATGGAGGAAATATGGACAGAAAGTTGTCAAGGGAAATCCAAATCCTAGGAGTTACTACAAATGTACATACCAAGGTTGTCCTGTAAGGAAACATGTTGAACGTGCATCACATGATATAAAAGCAGTGATCACAACTTATGAGGGAAAACACACCCATGATGTTCCTGCAGCTCGTGGAAGCGGAAGCAATTCTATGAACAGACCAACTCCAAGCAACCCTTTACATCAATCCAATGTTCCCTATTCCATAAGGCCTTTACAGATGCAATTGCCACAAGGGCAAGTACGTCCTTTCCACCCTGACTTGCTTCTTGGTCAAGGAAACTATGGTATCTCAGGATTTGGGAATCAAATGATGCCTTACATGAATCATCAGCAGCAGCAACAGCAGCAACACATGACTGAAAATGGTTTTTCCTCTAGAGCTAATGATGAACCTAAAGATTTCCTTGCATCTTTGTTGTGCTGA 1776 0.3801 MTSSSSSLENNNNNNFLNNFTFSTHPFMTTSSFSDLLASTIEEKSSGEKNGYGYGGGGNGGGVPKFKSIPPPSLPLSPPPVSPSSYFSIPPGLSPAELLDSPIMLNSSNILPSPTTGSFAGQSYNWMNNSEENQIIPKESDKSFSNFSFQTQQGPAVTGSNTTLKSSTVAVEQQPWSYQEITNQNGFSPENNMIQTENNSSMQSFSPETNMIQAENNNISMQSFSPEIANVQTITNNNGFQLDHNTNYTILSRRSDDGYNWRKYGQKQVRGSENPRSYYKCTYPNCPTKKKVERSIEGQITEIVYKGNHNHPKPQAGFRRNSSSSSNSLVIVPVNPNGNEIHDHSYGSHGNGQMDSVATPENSSISIGGDDDFEQSSLQRARSVGADEFVEEEPEPKRWRNESENQGIVLGHRTVREPRVVVQTTSDIDILDDGYKWRKYGQKVVKGNPNPRSYYKCTYQGCPVRKHVERASHDIKAVITTYEGKHTHDVPAARGSGSNSMNRPTPSNPLHQSNVPYSIRPLQMQLPQGQVRPFHPDLLLGQGNYGISGFGNQMMPYMNHQQQQQQQHMTENGFSSRANDEPKDFLASLLC* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2909 591 MobiDBLite consensus disorder prediction 561 576 - -
Tpr4g2909 591 Gene3D WRKY domain 418 484 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2909 591 ProSiteProfiles WRKY domain profile. 256 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2909 591 ProSiteProfiles WRKY domain profile. 426 491 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2909 591 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 524 IPR044810 GO:0003700
Tpr4g2909 591 Gene3D WRKY domain 243 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2909 591 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 45 524 - -
Tpr4g2909 591 MobiDBLite consensus disorder prediction 493 509 - -
Tpr4g2909 591 SUPERFAMILY WRKY DNA-binding domain 423 491 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2909 591 SUPERFAMILY WRKY DNA-binding domain 253 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2909 591 SMART WRKY_cls 431 490 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2909 591 SMART WRKY_cls 255 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2909 591 Pfam WRKY DNA -binding domain 256 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2909 591 Pfam WRKY DNA -binding domain 432 489 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2909 591 MobiDBLite consensus disorder prediction 486 509 - -
Tpr4g2909 591 MobiDBLite consensus disorder prediction 561 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2909 Tpr-Chr4 33019995 33024002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2909 253 524 WRKY Transcription Factor Family AT2G38470 61.733 1.37e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr4g2909 WRKY 6.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2909 K13424 - gmx:100127385 659.448