Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2906 ATGCAACCCTTTATCATTTTAATGCAAGTTTGCACCATTATCAATGTTGTTACTGCAAGCAATGACTTGAAATTGAGATCAAAATTCTCATCCATTTTAGTCTTTGGTGACTCAACAGTAGACACAGGAAACAATAACTACATCAAAACATTGGCCAAAGGAAATCATTTACCATATGGTAGGGATTTTCCTAATCATGTACCTACAGGTAGATTTTCTAATGGAAAATTGGCTATTGATTTTCTTGCATCTACAATGAATCTCAAAGATACTGTCCCTCCTTTCTTGGACCCAAACCTTTCAAATGAAGAGCTTCTAACAGGTGTTAGCTTTGCATCTGGAGGATCAGGTTTTGATGATTTGACGATAGCTTTATCAGGTGCTATATCAATTTCCAAACAAACTGAATATTTCAAAAATTATGTGACAAAGGTTAAAAGCATTGTAGGGGAAAAAGAAGCTAAAAATAGACTTGGAAATGCTTTGGTGATTATTAGTGCTGGAACTAATGACTTCCTTTTCAATTTTTATGATATTCCAACTAGAAGGTTGGAGTTCAACATTAGTGGATACCAAGATTATATTCAAAGTAAACTCCAAATTTTCATTGAGGAACTATATGACCTTGGATGCAGAAAATTTGCTGTGGCTGGGCTTCCATCTATTGGTTGCATACCTGTTCAAATAACAGCTAAGTTTGTAAATTTAAAGGATCGGAAATGTGTGGAGGATGAGAATTTAGAAGCTAAGATTTATAACCAAAAATTGGCTCGGAGATTACTTAAATTACAAGCAGTGCTTCAAGGAAGCAGAATTATATATACAAATATATATGACCCTTTGATTGGCCTTATCTATCATCCTCAAAAATATGGTTTCGTGGAAACAAGCAAAGGATGTTGCGGAACTGGCTTATTTGAAGTAACTCCATTGTGTAATGAACTCACACCAGTTTGTAATGATGCCTCAAAATATGTATTTTGGGATAGCGTACATCCAACTCAAGCAACCTACAAATATATTGCTAAGTACTTAGAATTGGAAGTCCTGCCTAAGTTCCAATTTCAAAGAGATTATAATATATTTGATTGA 1092 0.3434 MQPFIILMQVCTIINVVTASNDLKLRSKFSSILVFGDSTVDTGNNNYIKTLAKGNHLPYGRDFPNHVPTGRFSNGKLAIDFLASTMNLKDTVPPFLDPNLSNEELLTGVSFASGGSGFDDLTIALSGAISISKQTEYFKNYVTKVKSIVGEKEAKNRLGNALVIISAGTNDFLFNFYDIPTRRLEFNISGYQDYIQSKLQIFIEELYDLGCRKFAVAGLPSIGCIPVQITAKFVNLKDRKCVEDENLEAKIYNQKLARRLLKLQAVLQGSRIIYTNIYDPLIGLIYHPQKYGFVETSKGCCGTGLFEVTPLCNELTPVCNDASKYVFWDSVHPTQATYKYIAKYLELEVLPKFQFQRDYNIFD* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2906 363 CDD SGNH_plant_lipase_like 31 345 IPR035669 -
Tpr4g2906 363 Pfam GDSL-like Lipase/Acylhydrolase 32 345 IPR001087 GO:0016788
Tpr4g2906 363 Gene3D SGNH hydrolase 18 349 IPR036514 -
Tpr4g2906 363 PANTHER GDSL ESTERASE/LIPASE EXL3 24 344 - -
Tpr4g2906 363 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 24 344 - -
Tpr4g2906 363 SUPERFAMILY SGNH hydrolase 31 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2906 Tpr-Chr4 32972917 32980889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2906 29 349 Pollen Coat Proteome AT1G75910 34.568 1.73e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2906 - - gmx:100817270 580.096