Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2904 ATGTCACTCATACTGATCCATATTCGGAGATGGATGATGAATACAAAAGGATGGAAATTTGTCGGGTTTGCTTCAGCTGTTGTTGGACTTGTTTGTTATGCTCTAAGCTCTTCCTTCAACCATCTTTTTGGAAATTGGAATTTGTTGAAAATTATTCTTTACACTGTTTTCAGTTTCATTATTTGTCTATTGATTTTGTTTGCAAGTACATGGCAACACTCGACAAGTCTTCGATTCAAAGCTCATTCAGCATTTTTGGTATTGACTATCACTTCTGTCTATTCCTTTTTCTCTGATAAAATTATGAATGGAAAACCAGATGCATATAGTCTGATTTCATGTGCTGCCTTCGCTTTCATGTCACTCAGTTTATCGAGGCAAATTCGGTGTGGATTTGAAGTGGATCTGATGTACTTTTATCTAGGATGTTTAATTGTACAACTCATGAAGATTAATTTTTTGTTAGCTATTGTTGGAGTTTGTTATAGCTATTGTCTTATTATTCTTCGTTCTTCTTTCTCTTTGGTAAATGTTCAACATGAAACTCCGTGTCTTAGTCTTGAAGAACAACAAGTAGTCGTTCAAGTTGATTCAGAACACTTTCATACAAGTTTGGAACTATTGTTGCAACAGTTCCTGACTTGTATGAAAGAGCTTATGCAGAACAACTCTATTATTGCCAAGATGCTTTTGGAGAAGGTGAAAGGTAACTATAAGTTGGTGGTTACTGATCATAACTTCATACTTGATGCAATTCCGGACGAAACAATCAATAATCTTCGTGAAACGGTTAAACTGATGGTGGATGCTGGGTTTGAGAAAGAGTGCTCTGACTTGTACATTAGTTTGCGTAAAGAATGGTTGAAAGATTTATTAATAAATAAATTATTAGGATTGAGAAAGATGGGATTTCAGGATTACATGATTGGAAGATGGATTAAAGCTTCCAAGGTTGCTCTTAGAATATTATTTCCCTGTGAACGTCGCCTCTATGATCGTGTCTTCTCGGAATCCTTTATGTCATCTGATCTTCGTTTTTTTGAGATTTGTCGTAGAGCAACGATACAACTGTTGGACTTTGCTGATTCGTTTATGAATCAAAGTCCTTCTGCATGGCGTTTGTTTAAAATCGTTGACTTGTTTGAGACACTTTGTGATCTCATTCCCGAATTTGAAGCGTTGTTTATTGATTCCTTAGTGAATGAAGCAATAAAAACTAAGAATAGATTGGGTGAAGTAAGTAGAGATATTTTCATGGAATTTGGGAATCTGATCTTTCTTACGCCGGATGCAGAGTTAGATTGTTGGGTTGACGGTGGGGTTCATCCAATGAACTGCGAGGCTACAGGCTACATCGTTTTGGCTTTCTGGTCAAGACAGAAACTGGAGCAAATTTTACGAGACTACCCGTTGGTTGTTGCTAATGGAGAGGGAACATCTTTATTCGATTCGCAGATAGAGCTCATAATGGAGATGTTTGAGAGAAATTTGGAAGCTAAGTCACAAACTTATGAGGACTCCGCTTTGCGGTATTTTTTCATGCTGAATAATATAAGTATGATTAAGTACAAATTGGAAAACTTTTGGGATGATAGGTTCTTTAAAAACACAAGGCGATACTTGGAACTCTATTGTAAAAGCTCATGGAGTAATGTTGTAGATATTTTGAAAATCGATATAAATCAGTCAGCAGCGTCAAATTCTGACGCAAATTCAATGAAAGACAAGCTCAATCTGTTCAATCAAAAGTTTAAGGAGATGTGTGGAATTCAGTCTACATGGCGTGTTTTTGATGAACAGCTTAAGAAACAAATAATAATTTATGTGGAAAAAATGTTGTTGCCGGATTATGAAAACTTCATTGCGAGGTTTGAGAACGTTCTTGGTAAAAATGCTGACGAGTATAGAATGTCTGACATTCAAGCTCAACTCAATCATTTGTTTCTGTTACAGGATATTGATGTTGATTCTGTTAGCTTAATAAACTGTACTAATAGAGTTATTGTATCTTCATAA 2016 0.3576 MSLILIHIRRWMMNTKGWKFVGFASAVVGLVCYALSSSFNHLFGNWNLLKIILYTVFSFIICLLILFASTWQHSTSLRFKAHSAFLVLTITSVYSFFSDKIMNGKPDAYSLISCAAFAFMSLSLSRQIRCGFEVDLMYFYLGCLIVQLMKINFLLAIVGVCYSYCLIILRSSFSLVNVQHETPCLSLEEQQVVVQVDSEHFHTSLELLLQQFLTCMKELMQNNSIIAKMLLEKVKGNYKLVVTDHNFILDAIPDETINNLRETVKLMVDAGFEKECSDLYISLRKEWLKDLLINKLLGLRKMGFQDYMIGRWIKASKVALRILFPCERRLYDRVFSESFMSSDLRFFEICRRATIQLLDFADSFMNQSPSAWRLFKIVDLFETLCDLIPEFEALFIDSLVNEAIKTKNRLGEVSRDIFMEFGNLIFLTPDAELDCWVDGGVHPMNCEATGYIVLAFWSRQKLEQILRDYPLVVANGEGTSLFDSQIELIMEMFERNLEAKSQTYEDSALRYFFMLNNISMIKYKLENFWDDRFFKNTRRYLELYCKSSWSNVVDILKIDINQSAASNSDANSMKDKLNLFNQKFKEMCGIQSTWRVFDEQLKKQIIIYVEKMLLPDYENFIARFENVLGKNADEYRMSDIQAQLNHLFLLQDIDVDSVSLINCTNRVIVSS* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2904 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 649 IPR004140 GO:0000145|GO:0006887
Tpr4g2904 671 SUPERFAMILY Cullin repeat-like 209 648 IPR016159 -
Tpr4g2904 671 Gene3D Exocyst complex component Exo70 188 652 - -
Tpr4g2904 671 PANTHER PROTEIN, PUTATIVE-RELATED 9 649 - -
Tpr4g2904 671 Pfam Exo70 exocyst complex subunit 311 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2904 Tpr-Chr4 32962215 32969281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2904 242 648 EXO70 exocyst subunit family AT5G58430 42.529 1.46e-98 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2904 - - mtr:MTR_5g073960 617.846