Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2901 ATGAATCATACTATAATCCTAATTCGGAGATGGCTGATGCATACAAAGGTATGGAGATTTGTTGCCTTTGTTTCAGCAGTTGTTGGACTGGTTTGTTATGCTCTCAGCTCTTCCTTCAACCATCTATTTGGAAATTGGAATTTGTGGAAGATTATTCTTTACACAATTTTCGGCTTCATCATCAGCTTCATGATATTGTATGCAAATTTATGGAACCGCTCAAGAAGTCTTCGCTTCAAAGCTCATACGGCTTTTCTGGTATTGACAATCACCTCTGTCTATACCTTTTTCTTCGATAAAGTAGTGAATGGAAAACCAGATGCATATAGCTTGATTTCATGTGCTGCTTTTTCTATCATGTCGATGAGTTTGTCGAGGCAATCTCAGTGCGGATTCGAAGTGGATCTTCTTTACTTTTTTCTCGGATGTCTAACTGTGTTACTCATGAAGATTAAATTGCCGTTAGTCTTTGTTGGAGCAGGTTTCAGCTATTCTCTTATTATTATTCGTTCTTATTTATCTTCCATAAATAACATAGTCGAAAATGAGTATTTTGGACTCCAAGGTGAAAATTCAGTAATCATTGAAATGGATTCACTAATAAGGCCTAGTAATGATTTTTCTGTAATGATGCAAAACCTTATGACTTGTACTACTGCAATTCATCAGGAAATTTCAAATCTCATTAACAGGCATATAAAGGAATACATTCAAGATAGGAGTAAATCATTTTCTAGGTTTGATTTCGTGATGGATGCTCTTCTGTTATCAAAGATGCATAATCTTCATGAAATTGTGAAGTTGATGATAGGTGCTGGATATGAGAAAGAGTGTTCTCGTGCGTACAGTAATTGGCGGAAGGTATTTTTGCAGGAGTGTCTGATAAATAAAATATTTGTGTTGCAGGATGCAAAGATCAACATCGAGAATGACCGTAAAAGGGAACAATATGTAGATACCATGATGGGAAGATTGATGACTGCTTTGGATGTAACTATGACATGCTTGTTTCCCATTGAAAAACAGCTCTGTGATCGTGTCTTCTCGGGGTTCTCAACCACTGGTTCTAATTGTTTCATTGAGGTATGCCAATTAGCAACGTTTCAGCTGCTGAATTTGGCAAATTCAGTTGGTTCTGGGAGCCCTTCAAAATCGTGTTTGCTCAAAAAACTCGACATATTTAAGCAGTTACATAGTCTAATTCCGAAATTCGAATCTTTGTTTCCAGATTCGACATTACTGTACCAAGCCATCAAAGTTAAGAATAAATTAGGAGAAGCTAGCAGAGACCTTTTCAAGGACATGCATAATTTTATTTTCAAAGTCCCAGAAGCAGATCTAGTTGATTCATCTTATGGCCAACGTCATCAAATGACTATCGAGGTCATGAGCTACGTGACTTCTGTTTGCAGGTCAAAGCGGACGCTGGAACAAATTTTACACGAGTACTCCAAGGTTGACAATGAAGTGGAAGCATCATCTTTCTTCGTGAAGCAGGTAGAACAGATAATAGGGATGTTAGAAAAAAAATTGATATATGAGTCCGAAAACTACAAAGACCTTGCTTTGCGCCATATTTTCATGCTAAATAATAGGTCGCACATAGAAGCTGTGAACAAAATCTGGGAATTGGAAACAATTTTGGGCAATGAGTGGTTCCAAAATAACATAGAAAAAATCCATAAAAACCATGAGCTATATAAAGGAAGCTCATGGAACAAGGTGGTGGACTTTCTGAAGCTCGAGAACAATGAAAATACTACAGAAGAGTTATTGAAAGAGAAGATTCATTTGTTCAACAGTCACTTTGAAGATATATGCAGAGTTCAGTCCGTATGGTCTGTATATGACAATAAGCTAAGGGAAGAAATAATATCGTCCGTGGGAAAAATCCTATTGCCAGCATATGGAATCTTTGTTGGGAGGCTCCAGGATATTCTTGGTAACCAAGCTTATAAGTACATTAAATATGAACTGTTTGAAATTCAAGATCTACTCAACCATTTGTTTCTGGGAAACCAAAATATATGA 2031 0.3683 MNHTIILIRRWLMHTKVWRFVAFVSAVVGLVCYALSSSFNHLFGNWNLWKIILYTIFGFIISFMILYANLWNRSRSLRFKAHTAFLVLTITSVYTFFFDKVVNGKPDAYSLISCAAFSIMSMSLSRQSQCGFEVDLLYFFLGCLTVLLMKIKLPLVFVGAGFSYSLIIIRSYLSSINNIVENEYFGLQGENSVIIEMDSLIRPSNDFSVMMQNLMTCTTAIHQEISNLINRHIKEYIQDRSKSFSRFDFVMDALLLSKMHNLHEIVKLMIGAGYEKECSRAYSNWRKVFLQECLINKIFVLQDAKINIENDRKREQYVDTMMGRLMTALDVTMTCLFPIEKQLCDRVFSGFSTTGSNCFIEVCQLATFQLLNLANSVGSGSPSKSCLLKKLDIFKQLHSLIPKFESLFPDSTLLYQAIKVKNKLGEASRDLFKDMHNFIFKVPEADLVDSSYGQRHQMTIEVMSYVTSVCRSKRTLEQILHEYSKVDNEVEASSFFVKQVEQIIGMLEKKLIYESENYKDLALRHIFMLNNRSHIEAVNKIWELETILGNEWFQNNIEKIHKNHELYKGSSWNKVVDFLKLENNENTTEELLKEKIHLFNSHFEDICRVQSVWSVYDNKLREEIISSVGKILLPAYGIFVGRLQDILGNQAYKYIKYELFEIQDLLNHLFLGNQNI* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2901 676 Gene3D Exocyst complex component Exo70 169 676 - -
Tpr4g2901 676 Pfam Exo70 exocyst complex subunit 327 667 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2901 676 SUPERFAMILY Cullin repeat-like 180 670 IPR016159 -
Tpr4g2901 676 PANTHER PROTEIN, PUTATIVE-RELATED 9 671 - -
Tpr4g2901 676 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 671 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2901 Tpr-Chr4 32925691 32928022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2901 241 672 EXO70 exocyst subunit family AT5G58430 38.095 2.56e-89 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2901 - - mtr:MTR_5g074130 720.694