Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2897 ATGATGCATATTCTAATCCAAATTTGGAAATGGTTGATGCAGCCAAAGGTGTGGAGGTTTGTGGGTTTTGCATCATCCATTGTTGGATTGCTCTGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAGATTGGAATCTGTTAAAGATTTTTCTTTACAGTGTTTTCAGCTTAATCATCAGCCTCATCATTTTATTTGCAAAGATATGGCAACACTCAACAAGTCTTCGGTTCAAAGCTCACGCAGCGTTTTTGGTACTAGCAATCACTTCACTCTATTCATTTTTCTTCGATAAAGTAATGAATGGAAAACCAGATTCATATAGTCTGCTTTCATGTGCTGCTTTTTCTATCATGTTACTGAGTTTGTCGCGACAAACTCAGTGCGGATTTGAAATTGATCTTATGTACTTCTTCCTCGGAAGTCTAATTGTGCAACTCATGAAAATTAAATTAGAGTTATGCATTCTTGGAGTAGGATTCAGCTATTTAATTATTATTCTTCGTTCTGTTTTCTCTTCTATAAATGTTGTAATATATAATGAAGATCCTACTATCGTTCAAGATGAAAATCTGGTCGTTATTGAAGTCAATTTGCATTCACCACAACTGGCAAGTATTCGTAGTTGTGTGTTGGAACAACTAAGTAATTGTGTGACTGCGCTTCGGCAAGAAAATTCAAATATTATTGATATGCTTTTGGAGCAGTTGAAAGAATACCTTGGTGATGATTCTGAATTGACAGTTTCTGACCGTAATTTCGAAGCAGTGCTTAGACCAAAAGAAAATTTGAATCTCATGATAGACTCTATACCACCACAAACAATCGAAAACCTTCACAAAATTGCGAAACTGATGGTTGGAGCTGGATTCGAGATGGACTTTTCTGACGTGTATATCAGTTGCCGGAGAGGATGTTTGGACGAATGCCTCTCAAAGCTGGGGTTTCAAAAGGTTAGTGTAGAGGAAGTTCAGAATATGTCATGGGGGGACTTTAGAGACAAGATTGAAAGATGGATTAAGGCTTCAAACGTGGCTTTCAAGATATTGTTCCCCACTGAGCGGCGATTATGCGATCAGGTTTTCTTTGGGTTCTCCACTTCCGCTGATATATCGTTCACATGTGTTTGCAGGGAATCTACACTTCAGCTGCTAAATTTCGCCAATGCTATCGCCTTAGGAAGCCGGTCACCGGAGACGTTGTTTAGAGTCCTCGATGTGTTTGAAACAATGCGTGACCTAATTCCAGAGTTTGAATCTATATTAATTGGGTTGCTACAAAATGAAGCAACCACAATTTGGAAGAGACTAGGGGAAGCTATCCGAGGCATTTTCATGGAGTTGGAGAATCGGATCCGCCAAGATGCAGCAATGGGGGCCTCTTCCAGTTGTGGGCTTCTTGGAATTACCTGTTATGTGATGACATACCTTCGTGTTGCATGCGAGTCATGGCAGACACTGGAGAAAGTGTTTGAAGAAAACCATGGGCATTTGTTGAAGGAATATCCCAAAATTGAGGATAGAATGCATTCTTCTTCTATGCTATCAATGCAGATGGATTCGATTATGGAGCTATTAGAGAACAATTTGGAAGCCAGAAGCAAAATCTACAAGGACCCAGCTTTGTTCTATGTATTCTTGATGAATAATTTTGTATATAAATTGAAGATAGTTGTAATTGAATGA 1689 0.3896 MMHILIQIWKWLMQPKVWRFVGFASSIVGLLCYALSSSFNYLFGDWNLLKIFLYSVFSLIISLIILFAKIWQHSTSLRFKAHAAFLVLAITSLYSFFFDKVMNGKPDSYSLLSCAAFSIMLLSLSRQTQCGFEIDLMYFFLGSLIVQLMKIKLELCILGVGFSYLIIILRSVFSSINVVIYNEDPTIVQDENLVVIEVNLHSPQLASIRSCVLEQLSNCVTALRQENSNIIDMLLEQLKEYLGDDSELTVSDRNFEAVLRPKENLNLMIDSIPPQTIENLHKIAKLMVGAGFEMDFSDVYISCRRGCLDECLSKLGFQKVSVEEVQNMSWGDFRDKIERWIKASNVAFKILFPTERRLCDQVFFGFSTSADISFTCVCRESTLQLLNFANAIALGSRSPETLFRVLDVFETMRDLIPEFESILIGLLQNEATTIWKRLGEAIRGIFMELENRIRQDAAMGASSSCGLLGITCYVMTYLRVACESWQTLEKVFEENHGHLLKEYPKIEDRMHSSSMLSMQMDSIMELLENNLEARSKIYKDPALFYVFLMNNFVYKLKIVVIE* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2897 562 Pfam Exo70 exocyst complex subunit 338 557 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2897 562 Gene3D Exocyst complex component Exo70 204 560 - -
Tpr4g2897 562 SUPERFAMILY Cullin repeat-like 233 559 IPR016159 -
Tpr4g2897 562 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 554 IPR004140 GO:0000145|GO:0006887
Tpr4g2897 562 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 25 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2897 Tpr-Chr4 32888278 32890259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2897 243 559 EXO70 exocyst subunit family AT5G58430 58.879 1.58e-121 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2897 - K07195 cam:101500706 608.601