Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2896 ATGATGCATATTCTAATCCAAATTTGGAAATGGTTGATGCAGCCAAAGGTGTGGAGGTTTGTGGGTTTTGCATCATCCATTGTTGGATTGCTCTGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAGATTGGAATCTGTTAAAGATTTTTCTTTACAGTGTTTTCAGCTTAATCATCAGCCTCATCATTTTATTTGCAAAGATATGGCAACACTCAACAAGTCTTCGGTTCAAAGCTCACGCAGCGTTTTTGGTACTAGCAATCACTTCACTCTATTCATTTTTCTTCGATAAAGTAATGAATGGAAAACCAGATTCATATAGTCTGCTTTCATGTGCTGCTTTTTCTATCATGTTACTGAGTTTGTCGCGACAAACTCAGTGCGGATTTGAAATTGATCTTATGTACTTCTTCCTCGGAAGTCTAATTGTGCAACTCATGAAAATTAAATTAGAGTTATGCATTCTTGGAGTAGGATTCAGCTATTTAATTATTATTCTTCGTTCTGTTTTCTCTTCTATAAATGTTGTAATATATAATGAAGATCCTACTATCGTTCAAGATGAAAATCTGGTCGTTATTGAAGTCAATTTGCATTCACCACAACTGGCAAGTATTCGTAGTTGTGTGTTGGAACAACTAAGTAATTGTGTGACTGCGCTTCGGCAAGAAAATTCAAATATTATTGATATGCTTTTGGAGCAGTTGAAAGAATACCTTGGTGATGATTCTGAATTGACAGTTTCTGACCGTAATTTCGAAGCAGTGCTTAGACCAAAAGAAAATTTGAATCTCATGATAGACTCTATACCACCACAAACAATCGAAAACCTTCACAAAATTGCGAAACTGATGGTTGGAGCTGGATTCGAGATGGACTTTTCTGACGTGTATATCAGTTGCCGGAGAGGATGTTTGGACGAATGCCTCTCAAAGCTGGGGTTTCAAAAGGTTAGTGTAGAGGAAGTTCAGAATATGTCATGGGGGGACTTTAGAGACAAGATTGAAAGATGGATTAAGGCTTCAAACGTGGCTTTCAAGATATTGTTCCCCACTGAGCGGCGATTATGCGATCAGGTTTTCTTTGGGTTCTCCACTTCCGCTGATATATCGTTCACATGTGTTTGCAGGGAATCTACACTTCAGCTGCTAAATTTCGCCAATGCTATCGCCTTAGGAAGCCGGTCACCGGAGACGTTGTTTAGAGTCCTCGATGTGTTTGAAACAATGCGTGACCTAATTCCAGAGTTTGAATCTATATTAATTGGGTTGCTACAAAATGAAGCAACCACAATTTGGAAGAGACTAGGGGAAGCTATCCGAGGCATTTTCATGGAGTTGGAGAATCGGATCCGCCAAGATGCAGCAATGGGGGCCTCTTCCAGTTGTGGGCTTCTTGGAATTACCTGTTATGTGATGACATACCTTCGTGTTGCATGCGAGTCATGGCAGACACTGGAGAAAGTGTTTGAAGAAAACCATGGGCATTTGTTGAAGGAATATCCCAAAATTGAGGATAGAATGCATTCTTCTTCTATGCTATCAATGCAGATGGATTCGATTATGGAGCTATTAGAGAACAATTTGGAAGCCAGAAGCAAAATCTACAAGGACCCAGCTTTGTTCTATGTATTCTTGATGAATAACTGCATGTACATGGTTCATAAAACCAAAGATGGTAAATTGGAAACCATTTTAGGGGATGCTGTGATCCAAAAATATACAGCGAAAATTCAGCAACACCGTGAGAACTATCAAAGAATCTCATGGAATAAGGTGTTGGACATTTTGAAGTTGGACGGCAACGGATCAATGCAGCTTAATGAGGTAGCTGAGTCAATGAAACAGAAGCTGAAGTCATTCAACACGCTATTTGATGAAATATGCAGGGTTCAATCTTCATGGTCTGTCATTGATGAACAGCTTAGGGAAGAAATAAGGATTTCCATTAAGAAAACCTTGTTGCCAGCTTATGGAAACTTCATTGGGAGGTTTCGAAGTGTTCCGGAACTTGGTAAGCATGCTGACAAATATATTAAGTATGAAGCAGATAATATTGAAGCAAGAATTGAAGGTTTGTTTGAGGGGATGCAGTTTATCAACTGGTAG 2115 0.3924 MMHILIQIWKWLMQPKVWRFVGFASSIVGLLCYALSSSFNYLFGDWNLLKIFLYSVFSLIISLIILFAKIWQHSTSLRFKAHAAFLVLAITSLYSFFFDKVMNGKPDSYSLLSCAAFSIMLLSLSRQTQCGFEIDLMYFFLGSLIVQLMKIKLELCILGVGFSYLIIILRSVFSSINVVIYNEDPTIVQDENLVVIEVNLHSPQLASIRSCVLEQLSNCVTALRQENSNIIDMLLEQLKEYLGDDSELTVSDRNFEAVLRPKENLNLMIDSIPPQTIENLHKIAKLMVGAGFEMDFSDVYISCRRGCLDECLSKLGFQKVSVEEVQNMSWGDFRDKIERWIKASNVAFKILFPTERRLCDQVFFGFSTSADISFTCVCRESTLQLLNFANAIALGSRSPETLFRVLDVFETMRDLIPEFESILIGLLQNEATTIWKRLGEAIRGIFMELENRIRQDAAMGASSSCGLLGITCYVMTYLRVACESWQTLEKVFEENHGHLLKEYPKIEDRMHSSSMLSMQMDSIMELLENNLEARSKIYKDPALFYVFLMNNCMYMVHKTKDGKLETILGDAVIQKYTAKIQQHRENYQRISWNKVLDILKLDGNGSMQLNEVAESMKQKLKSFNTLFDEICRVQSSWSVIDEQLREEIRISIKKTLLPAYGNFIGRFRSVPELGKHADKYIKYEADNIEARIEGLFEGMQFINW* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2896 704 Gene3D Exocyst complex component Exo70 204 701 - -
Tpr4g2896 704 Coils Coil 573 593 - -
Tpr4g2896 704 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 697 IPR004140 GO:0000145|GO:0006887
Tpr4g2896 704 Pfam Exo70 exocyst complex subunit 338 693 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2896 704 SUPERFAMILY Cullin repeat-like 233 697 IPR016159 -
Tpr4g2896 704 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 25 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2896 Tpr-Chr4 32881409 32885978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2896 243 698 EXO70 exocyst subunit family AT5G58430 57.826 3.12e-177 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2896 - K07195 cam:101502613 746.888