Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2895 ATGGATGGTCTCAACTCTCAATCTCAGTCTCACACAGTCCGAAAACAATTCTTATACACTGTGGACAACATGATGCATATTCTAAATCAAATTGGGAGATGGTTGATGCAGCCAAATTTGTGGAGATTTATAGGCTTCGCGTCAGCTGTTGTTGGACTGCTCTGTTATGCTCTAAGCTCTTCTTTCAACTATCTCTTTGGAGAATGGAATTTGCTGAAAATATTTCTTTATAGTGTTTTCAGTTTCATCATATGCTTGGTGATTTTATTTGCAAAATTATTTCAACATTCGAGAAGTCTCCGGTTCAAAGCTCATACAGCATTTTTGGTATTGACAATCACCTCTGTTTATTCCTTTTTCTTCGATAAAGTGATGAATGGGAAACCAGATGCATATAGTTTAATTTCATGTGCTGCTTTTTCTATCATGTCATTGAGTTTGTCGAGGCAAACTCAATGCGGATTTGAAATTGATCTTCTCTATTTCTTCCTCGGATGTCTAATTGTGCAACTCATGAAGATTAAATTGCAGTTATTCTTTCTTGGAGCAGGTTTCAGCTACTCTCTTATTATTCTCCGTTCTTTTTTCTCTTCTATTGATGCTAGAGGACATAATCAATACTCTCAATTCCAAGATGGAAACCCGGTGGTTCTTCATATTGATTCACTACAACTAGCTAATACTGATATTGCTTGTGCTAGAAGTAGAAATAACATCGATTCACCACCATTGGTGATCACTACTGATATTAGTAGTATGATGGAACAACTCGGGACTTTTGTGAAGACGCTTCAACAAGAAAATTTAAATCTCATTCAGATGGTTTTGGATCATGTAAAAAACTATTGTGAAGAACACTCTCCGTTGGTGGTGACCGATCCTAACTTCATGATGGATGCGCTGAAGCAAGAAACAATCAAAGGCCTGGAGGAAACAGCGAAGGTTATGGTGAGCGCTGGGTTTGAGAAGGATTTTTCTGAGGTGTACAACAGTTGTCGGAGGGAATGCTTGGACAAATGCCTAATGCATAGTTTATTCGTGTTAAAGAAACTAAGCAGCGAGGATATTCATGATATGCCATGGAAGGATGTCGAAGACGAGATTAAAAGATGGATTAGAGCTTTCAATGTCACCCTTAAGATACTTTTCCATGGTGAGCGACAACTCTGTGATCGTGTTTTCTCCGGGTTCTCATCTGCCGCTGATTTCTCCTTCATTGAGATTTGCAGGGTATCCACCACTCAACTTTTAAATTTTGCAGACTCTATTGCAACCGTAAGTCGTTCACCAGAGTGTTTGTTTAAAATCATCGAGGTGTTTGAAACATTTCGTGACCTAATTCCCGAATTTGAGTCCTTATTTTGTGATCAGTACGGTGTGTCTCTAAAGAATGAAGCAATTGCAATATGGAAGAAAATTGGGAAAGCAATTAGAAGTATTTTCATGGAGTTAGAGTATTTGCTTGAGCAAAACATGATTATGGGGACATATTGCAGCAGCTGTCTTCACCCGATTACCCAACATGTGATGAACTACCTCCGTGTAGTTTCAAAATCTCGGCAAACACTAGAGCAAGTGTTTGACGATTCTTCACTTTCTGGGAAGATTCTTAATATTATGGATGTATTGGAGCGTAATTTGGAAGCAAAGGCCAAATGCTGTGCGGATCCTTCTTTAGGCTATATTTTCTTGATGAATAACAACACATATATAGTTCAGATGTCCAAAGATAATGAACTAGGAATCCTTTTAGGGGATGAATGGTTCCGAATACACAGTCAGAAAATTTGGCACTACCATGAACAATATCAGAAAACCTGGGGCACAATGCCCCCCACTTTAGTGCAAGAATTTTTCCCTTTATTGTGGAGGAAAGGTTCAGAAGGATCAAAGGTGTACAAAGGAAATGTGGAGGAAATAGAAGCATCACGCTCTCAACCACCAAAAAGTAGGAAAATGGAACCGGAGACAGAGATAAGAACAATAGTACTGATCTCTCCTGCACCAAACTTTGAAAGCATAGAAGAAATGCCACCGAAAGACGGGTTTATCTGGAAAAAATATGGCAAGACTACTACATACCCGAGGAGTTACTATAGGTGCAACCACATGAAATTAGATGTTTGTCGAGCCAAGAAGAAAGTACAACAACTTTGTTATAATCCAATCGTGTTTGAAGTAACATACAAAGTTGCACATTCCTGCCGTATGTCCTTGACAATACCATCATTATTTTTACCAGCACGAAGGATCTCAAAGGATATGACTCCAACCACCATGCCGGCATCAACTTCATATTCTGAGTGGTTTTCATCGGGCACGCCAGCCAAATACATAGACTCGATCCCAACGGCCAAGCTAGCTGCTCCGGATGACGGTGGGCATCATCCTATGATGGCCAATGTCGTAGGCTTTCTTATTTCAGCTATCGAATCACAGTCCTCGATCAGCTTTGACGAAGCATTTTCACCACAAACAGAGGGGACAATGGAACTGTTAGAGAGAATATTGGCATCGAAGTCCGGAAAATATGTGGACGAGTCTTTGCGTCATTTCTTCATGATGAATAATTGGAGATGCTTAGAAATGACATATAAAAGAATGCAACTGAATGCAATATTCGGAGATGTTTGGTTCCAAAGAAACAGAACAAAAGTCCAAGAAAAACTTGAACTCTACAAAAGAGACTCATGGGATAAGGTGTTGGAATTTTTAAAGTTGGATATTATCAATGAATCGATGGAAATTAATTGTGCAATAGATTTGATGAAACAAAAACTCAGTTTGTTTAACATGAACTTTACCGAGACATGTCGAATTCAGTGCACTTGGTCTGTTTATGATGAGAAGCTAAGGGTAGAAATAATTAAATCTCTGAAAAACACCTTGCTGCCAGCATATGGAATCTTCATTGGGAAGTTTCAGGATTTTCTTAAAGACAAGGCTTACAAGTATATTGAGTATGGAATGTTTGACATTCATGATGTACTTGATAATTTGTTTCTCGGAACCAAGAAATACAGATGA 3027 0.3878 MDGLNSQSQSHTVRKQFLYTVDNMMHILNQIGRWLMQPNLWRFIGFASAVVGLLCYALSSSFNYLFGEWNLLKIFLYSVFSFIICLVILFAKLFQHSRSLRFKAHTAFLVLTITSVYSFFFDKVMNGKPDAYSLISCAAFSIMSLSLSRQTQCGFEIDLLYFFLGCLIVQLMKIKLQLFFLGAGFSYSLIILRSFFSSIDARGHNQYSQFQDGNPVVLHIDSLQLANTDIACARSRNNIDSPPLVITTDISSMMEQLGTFVKTLQQENLNLIQMVLDHVKNYCEEHSPLVVTDPNFMMDALKQETIKGLEETAKVMVSAGFEKDFSEVYNSCRRECLDKCLMHSLFVLKKLSSEDIHDMPWKDVEDEIKRWIRAFNVTLKILFHGERQLCDRVFSGFSSAADFSFIEICRVSTTQLLNFADSIATVSRSPECLFKIIEVFETFRDLIPEFESLFCDQYGVSLKNEAIAIWKKIGKAIRSIFMELEYLLEQNMIMGTYCSSCLHPITQHVMNYLRVVSKSRQTLEQVFDDSSLSGKILNIMDVLERNLEAKAKCCADPSLGYIFLMNNNTYIVQMSKDNELGILLGDEWFRIHSQKIWHYHEQYQKTWGTMPPTLVQEFFPLLWRKGSEGSKVYKGNVEEIEASRSQPPKSRKMEPETEIRTIVLISPAPNFESIEEMPPKDGFIWKKYGKTTTYPRSYYRCNHMKLDVCRAKKKVQQLCYNPIVFEVTYKVAHSCRMSLTIPSLFLPARRISKDMTPTTMPASTSYSEWFSSGTPAKYIDSIPTAKLAAPDDGGHHPMMANVVGFLISAIESQSSISFDEAFSPQTEGTMELLERILASKSGKYVDESLRHFFMMNNWRCLEMTYKRMQLNAIFGDVWFQRNRTKVQEKLELYKRDSWDKVLEFLKLDIINESMEINCAIDLMKQKLSLFNMNFTETCRIQCTWSVYDEKLRVEIIKSLKNTLLPAYGIFIGKFQDFLKDKAYKYIEYGMFDIHDVLDNLFLGTKKYR* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2895 1008 PANTHER EXOCYST COMPLEX PROTEIN EXO70 45 608 IPR004140 GO:0000145|GO:0006887
Tpr4g2895 1008 PANTHER EXOCYST COMPLEX PROTEIN EXO70 776 1001 IPR004140 GO:0000145|GO:0006887
Tpr4g2895 1008 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 45 608 - -
Tpr4g2895 1008 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 776 1001 - -
Tpr4g2895 1008 SUPERFAMILY Cullin repeat-like 254 623 IPR016159 -
Tpr4g2895 1008 SUPERFAMILY WRKY DNA-binding domain 675 737 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2895 1008 ProSiteProfiles WRKY domain profile. 681 738 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2895 1008 Gene3D Exocyst complex component Exo70 777 1008 - -
Tpr4g2895 1008 Gene3D Exocyst complex component Exo70 246 640 - -
Tpr4g2895 1008 SMART WRKY_cls 679 737 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2895 1008 Pfam Exo70 exocyst complex subunit 369 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2895 1008 Pfam Exo70 exocyst complex subunit 813 998 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2895 1008 Pfam WRKY DNA -binding domain 680 736 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2895 1008 Gene3D WRKY domain 670 738 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2895 1008 SUPERFAMILY Cullin repeat-like 787 1001 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2895 Tpr-Chr4 32873895 32879998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2895 291 610 EXO70 exocyst subunit family AT5G58430 55.455 2.25e-107 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr4g2895 Exo70 2.6e-61 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2895 - - cam:101500706 1144.41