Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2893 ATGATGCATATTCTAATCCAAATTTGGAAATGGTTGATGCAGCCAAAGTTGTGGAGGTTTGTGGGTTTTGTTTCATCCATTGTTGGATTGCTCTGTTATGGTCTAAGCTCTTCCTTCAACTATCTCTTTGGAGATTGGAATCTGTTGAAGATTTTCCTTTACAGTGTTTTCAGCTTAATCATCAGCCTCATCATTTTATTTGCAAAGACATGGCAACACTCAACAAGTCTTCGATTCAAAGCTCACGCAGCATTTTTGGTATTAACAATCACTTCACTCTATTCATTTTTCTTTGATAAAGTAATGAATGGAAAACCAGATGCATATAGTCTACTTTCATGTGCTGCTTTTGCTATCATGTTACTAAGTTTGTCACGGAAAACTCAATGCGGATTTGAAGTGGATCTTCTTTACTTTTTTCTCGGATGTCTAATTGTGCAACTCATGAAGATTAAACTGCAGTTATTCATTGTTGGAGCAGGTTTCGGTTACTTAATTATTATTCTACGTTCTTCTTTCTCTTCTATAGATGTTGTAATATATAATGAAGAACTTACTAGTCCCCAAGATGAAAATCTGGTAATTATTGAAGTCAATTCAGATTCACTGCAACTAACCAGTACCGATATTGGTAGCAGTATGGTGGAACAACTCAGTAACTATGTGAAGGCACTTCGGCAAGAAAATTCAAATATCATCGAAAAGCTTAGAGATGATTCTGGATTTATTATGTCTGACCCTGAGTTCATGATCAAGGCCTTGCCAACTGAAACAATCGACAACCTTCACAAAACAGCCAAGTTGATGGTTAGTGCTGGATTTGAGAAGGACTTCTCCGACGTGTATATCAGTTGCCGTAAGGAATGTTTGGTAGAAAGCTTCACAAGGTTAGGGTTCAAGAAACTCACCATCGAGGACATTCAGATGTTGTCATGGAAGGAAATTGAAGACGGTCTTAAAAGATGGATTAAAGCTTCCAAAGTGGCTTTGAAGATATTGTTTCCAACTGAGCGACGATTATGTGATCGGGTTTTCTTTGGGTTCTCATCCACCGCTGATTTATCATTTATGAATGTCTGTATGGAATTTACACTTCAGTTGCTGAATTTTGCCGATGCTATTGCCATTGGAAGCCGATCACCTGAGCGGCTGTTTAGCGTCATCGACATGTTTGAAACAATGCGTGACCTCATTCCAGAGTTTGAGTCTCTGTTCCGTGATCAATACAGTTTGTCGCTGCAAAACGAAGCAACCACAATTTGGAAGAGATTGGGAGAAGCGATCAGAGGCATTTTTGCGGAGTTGGCGGATCTGATTCGCCAAGATCCGGCATGGGATGCGGTTCCCGACAGTGGTGGACTTCACCCGATTACCCGTTACGTGATGAACTATCTCCCTGCTGCTAGTCGATCACGGAAGACCCTGGAGCAAGTGTTTGAAGAAGATTATGAGAATCCATTGAAGGAATATCCCAAAATTGAGGATAGAATGCATTGCTCTAATTCCTCTCTCTCAGTGCAGATGCGTGTGATTATGGAGCTATTAGAGAGCAATTTGCAAGCCAAATCCAAAATCTATGAGGATCCTGGTTTGTACTATGTTTTCTTGATTAATAACAGCAGGTACATTATTCAAAAGACCAAAGATAGTGAATTAGAAACTATTTTAGGAGACGATTGGATCAAAAAACACATTGAATACAGCAATGGATCAATGCAGCCTAATGAGGTAGAAAGTAGATGA 1743 0.3947 MMHILIQIWKWLMQPKLWRFVGFVSSIVGLLCYGLSSSFNYLFGDWNLLKIFLYSVFSLIISLIILFAKTWQHSTSLRFKAHAAFLVLTITSLYSFFFDKVMNGKPDAYSLLSCAAFAIMLLSLSRKTQCGFEVDLLYFFLGCLIVQLMKIKLQLFIVGAGFGYLIIILRSSFSSIDVVIYNEELTSPQDENLVIIEVNSDSLQLTSTDIGSSMVEQLSNYVKALRQENSNIIEKLRDDSGFIMSDPEFMIKALPTETIDNLHKTAKLMVSAGFEKDFSDVYISCRKECLVESFTRLGFKKLTIEDIQMLSWKEIEDGLKRWIKASKVALKILFPTERRLCDRVFFGFSSTADLSFMNVCMEFTLQLLNFADAIAIGSRSPERLFSVIDMFETMRDLIPEFESLFRDQYSLSLQNEATTIWKRLGEAIRGIFAELADLIRQDPAWDAVPDSGGLHPITRYVMNYLPAASRSRKTLEQVFEEDYENPLKEYPKIEDRMHCSNSSLSVQMRVIMELLESNLQAKSKIYEDPGLYYVFLINNSRYIIQKTKDSELETILGDDWIKKHIEYSNGSMQPNEVESR* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2893 580 Coils Coil 215 235 - -
Tpr4g2893 580 Gene3D Exocyst complex component Exo70 194 573 - -
Tpr4g2893 580 SUPERFAMILY Cullin repeat-like 223 566 IPR016159 -
Tpr4g2893 580 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 564 IPR004140 GO:0000145|GO:0006887
Tpr4g2893 580 Pfam Exo70 exocyst complex subunit 320 566 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2893 580 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 25 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2893 Tpr-Chr4 32862704 32871236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2893 244 564 EXO70 exocyst subunit family AT5G58430 65.109 1.72e-136 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2893 - K07195 cam:101500706 653.284