Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2892 ATGATGCATATTCTAATCCAAATTTGGAAATGGTTGATGCAGCCAAAGTTGTGGAGGTTTGTGGGTTTTGTTTCATCCATTGTTGGATTGCTCTGTTATGGTCTAAGCTCTTCCTTCAACTATCTCTTTGGAGATTGGAATCTGTTGAAGATTTTCCTTTACAGTGTTTTCAGCTTAATCATCAGCCTCATCATTTTATTTGCAAAGACATGGCAACACTCAACAAGTCTTCGATTCAAAGCTCACGCAGCATTTTTGGTATTAACAATCACTTCACTCTATTCATTTTTCTTTGATAAAGTAATGAATGGAAAACCAGATGCATATAGTCTACTTTCATGTGCTGCTTTTGCTATCATGTTACTAAGTTTGTCACGGAAAACTCAATGCGGATTTGAAGTGGATCTTCTTTACTTTTTTCTCGGATGTCTAATTGTGCAACTCATGAAGATTAAACTGCAGTTATTCATTGTTGGAGCAGGTTTCGGTTACTTAATTATTATTTTACGTTCTTCTTTCTCTTCTATAGATGTTGTAATATATAATGCAGAACTTACTAGTCCCCAAGCTGAAAATCTGGTAATTATTGAAGTCAATTCAGATTCACTGCAACTAACCAGTACCGATATTGGTAGCAGTATGGTGGAACAACTCAGTAACTATGTGAAGGCACTTCGGCAAGAAAATTCAAATATCATCGAAAAGCTTGGAGATGATTCTGGATTTATTATGTCTGACCCTGACTTCATGATCAAGGCCTTGCCAACTGAAACAATCGACAACCTTCACAAAACAGCCAAGTTGATGGTTAGTGCTGGATTTGAGAAGGACTTCTCCGACGTGTATATCAGTTGCCGTAAGGAATGTTTGGTAGAAAGCCTCACAAGGTTAGGGTTCAAGAAACTCAACATCGAGGACATTCAGATGTTGTCATGGATGGAAATTGAAGACGGTCTTGAAAGATGGATTAAAGCTTCCAAATTGGCTTTGAAGATATTGTTTCCAACTGAGCGACGATTATGTGATCGGGTTTTCTTTGGGTTCTCATCCATCGCTGATTTATCATTTATGAATGTCTGTATGGAATTTACACTTCAGTTGCTGAATTTTGCCGATGCTATTGCCATTGGAAGCCAATCACCTGAGCGGTTGTTTAAAGTCATTGACATGTTTGAAACAATGCGTGACCTCATTCCAGAGTTTGAGTGTCTGTTCCGTGATCAATACAGTTTGTCGCTGCAAAATGAAGCAACCACAATTTGGAAGAAATTGGGGGAAGCAATTAGAGGGATTTTCATGAAGTTGGAGACTTTGATTCGCAGAAATCGAGCTAAGGCAGCTGTTCCGGGTGGTGGACTTCACCCGATTACTCGCTACGTGATGAATTATCTCCGCGCTGCATGTCAGTCAAGACAGACATTGGAGCAAGTGTTTGAAGACTATGGACATCCATTGAAAGAATACCCTAAAATTGATGATAGAATGTCTTCATCTTCCTCTTTGTCAGTGCAAATGGATTGGATTATGCAGCTATTAGAGAGCAATTTGGAAGCCAAATCGAAAATCTATAAAGATCCTGCATTGTGCTATGTTTTCTTGATGAATAACTGCAGGTACATTGTTCAAAAGGCTGAAGATAGTGAATTAGGGTCACTTTTAGGTGATGATTGGATCAAAAAACACACTGCGAAAATTCGGCAGTACCATGTGCAGTATCAAATAAGGTCATGGAATAAGGTGTTTGGGTTTCTGAAAGTTAAATACAATGGATTAATCCCACCTAAAGGGGTAGCCAAGTCTATGAAAAAGAAGCTGAAATCATTCAACATGGTGTTTGATGATTTATGCAGGGTTCAATCTTCATGGTTTATCTTTGATAAACAACTTAGGGAAGAAATAAGAATTTCAATTGAGAAACTTTTGTTACCAGCTTATGAAAATTTCATGGCGAGGTTTCATAATATTGCTGAAGTTGGTAAGCATGCTGAGAAATACATTAAGTACGAAACAGAGGAGATTGAAGCAAGACTCAATGATTTGTTTCAGGGAAGCAGTGGATCAACTGGTAGCAGAAAGAGAAGCTAA 2085 0.3818 MMHILIQIWKWLMQPKLWRFVGFVSSIVGLLCYGLSSSFNYLFGDWNLLKIFLYSVFSLIISLIILFAKTWQHSTSLRFKAHAAFLVLTITSLYSFFFDKVMNGKPDAYSLLSCAAFAIMLLSLSRKTQCGFEVDLLYFFLGCLIVQLMKIKLQLFIVGAGFGYLIIILRSSFSSIDVVIYNAELTSPQAENLVIIEVNSDSLQLTSTDIGSSMVEQLSNYVKALRQENSNIIEKLGDDSGFIMSDPDFMIKALPTETIDNLHKTAKLMVSAGFEKDFSDVYISCRKECLVESLTRLGFKKLNIEDIQMLSWMEIEDGLERWIKASKLALKILFPTERRLCDRVFFGFSSIADLSFMNVCMEFTLQLLNFADAIAIGSQSPERLFKVIDMFETMRDLIPEFECLFRDQYSLSLQNEATTIWKKLGEAIRGIFMKLETLIRRNRAKAAVPGGGLHPITRYVMNYLRAACQSRQTLEQVFEDYGHPLKEYPKIDDRMSSSSSLSVQMDWIMQLLESNLEAKSKIYKDPALCYVFLMNNCRYIVQKAEDSELGSLLGDDWIKKHTAKIRQYHVQYQIRSWNKVFGFLKVKYNGLIPPKGVAKSMKKKLKSFNMVFDDLCRVQSSWFIFDKQLREEIRISIEKLLLPAYENFMARFHNIAEVGKHAEKYIKYETEEIEARLNDLFQGSSGSTGSRKRS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2892 694 Gene3D Exocyst complex component Exo70 195 691 - -
Tpr4g2892 694 Coils Coil 215 235 - -
Tpr4g2892 694 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 25 682 - -
Tpr4g2892 694 Pfam Exo70 exocyst complex subunit 320 679 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2892 694 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 682 IPR004140 GO:0000145|GO:0006887
Tpr4g2892 694 SUPERFAMILY Cullin repeat-like 242 681 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2892 Tpr-Chr4 32859646 32863102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2892 237 685 EXO70 exocyst subunit family AT5G58430 63.216 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2892 K07195 - cam:101502613 756.903