Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2884 ATGGGGTTTCTCGTGCTTCTTTCTCTCTTGTCAATCTTTATTCTATTCATCATCCATATACACAAAACAAAGAGTAGAACATCATCAATTCCACCACCAGGTCCTAAACCACTACCTATAATTGGAAATCTACACCAAATTGATCCTTCATTACCACATCACTCCTTATGGCAACTTTCCAAACACTATGGTCCTATCATGTCTTTGCACCTTGGCTATATCCCAACCTTAGTTGTTTCTTCATCAAAAATGGCCAAAGAAGTAATGCAAACCCATGACCTTAAATTTTCAAGTAGACCATCTTTACTAGGACTAAGAAAATTGTCTTACAATTGCTTAGATTTGGCTTTTGCACCTTATAGCCCTTACTGGAAAGAAATGAAAAAACATTGTGTTGTTAATCTCTTTAGCACTCAACGTGTTCATTCTTTTAGATCCATTAGAGAAAATGAAGTGGCCCAATTGATTCAAAAGTTGTCACAATATGATGGTGATGAAAAAGGTGTGAACTTGAGTGAAACAATGATGTCTTTCACAAATACACTTATATGTAAGATAGCTTTAGGAAAAAAATATTTTTTTGATTATGAGGAAGAAGTTGAATTGGGAAGTGAACAAAGGAGAAGTAGATTGAAAATTTTACTTAATGAAACTCAAGCTTTGTTAACTGAATTTTACTTTTCAGATCATTTTCCTTTGTTGGGTTGGGTTGATAGAATCAAAGGAACTCTTTGGAGGCTTGATAAAACTTTCAAGGAATTAGATTTGATATACCAACGAGTCATCGATGATCATATGGATAATTTAGGAAGGCCTAAAAGCAAGGAACAAGAAGTAGTTGATATTATTGATATATTATTGCAGATGATGAATGATCACTCACTTTCTTTTGAGCTCACTCTTGACCACATCAAAGCTTTGCTTATGAACATCTTTATAGGAGGAACCGACACAAGTACAGCAACAGTGGTTTGGGCTATGACAGTATTGATGAACAATCCTAGAGTGATGAACAAGGTTCAAATGGAAATCAGAAACTTATATGAAAACAAAGATTTCATAAATGAAGATGATATTGAAAAGCTTCCTTATCTTAAATCAGTGGTCAAAGAGACATTGAGATTATTCCCTCCGACACCATTATTATTGCCAAGGGAAACTATACAAAACTGTAACATAGATGACTATGAGATTAAACCAAAAACTCTAGTGTATGTTAATGCATGGGCCATAGGAAGAGATCCTGAGAATTGGGAAGATCCTGAAGAGTTTTATCCTGAAAGATTCTTTATGAGTTCAGTTGATTTTGAAGGGAATAGTTTTGAGTTGATTCCGTTTGGAAGTGGAAGAAGAATGTGCCCAGGAATAAAAATGGGAGTGCGCACTGTTGAACTTTCACTTGCTAATCTTGTTCACTCTTTTGAATGGAAATTGCCTAATGGTTTTGATAAGGATCAAGTTTTGGATACACAAGTGAAACCAGGGATCATTATGCATAAGAAAATTGATCTTTATCTTGTTCCGAGGAAAAGGAAACAATAG 1542 0.3476 MGFLVLLSLLSIFILFIIHIHKTKSRTSSIPPPGPKPLPIIGNLHQIDPSLPHHSLWQLSKHYGPIMSLHLGYIPTLVVSSSKMAKEVMQTHDLKFSSRPSLLGLRKLSYNCLDLAFAPYSPYWKEMKKHCVVNLFSTQRVHSFRSIRENEVAQLIQKLSQYDGDEKGVNLSETMMSFTNTLICKIALGKKYFFDYEEEVELGSEQRRSRLKILLNETQALLTEFYFSDHFPLLGWVDRIKGTLWRLDKTFKELDLIYQRVIDDHMDNLGRPKSKEQEVVDIIDILLQMMNDHSLSFELTLDHIKALLMNIFIGGTDTSTATVVWAMTVLMNNPRVMNKVQMEIRNLYENKDFINEDDIEKLPYLKSVVKETLRLFPPTPLLLPRETIQNCNIDDYEIKPKTLVYVNAWAIGRDPENWEDPEEFYPERFFMSSVDFEGNSFELIPFGSGRRMCPGIKMGVRTVELSLANLVHSFEWKLPNGFDKDQVLDTQVKPGIIMHKKIDLYLVPRKRKQ* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2884 513 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 Pfam Cytochrome P450 32 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 Coils Coil 337 357 - -
Tpr4g2884 513 PANTHER CYTOCHROME P450 83B1 9 510 - -
Tpr4g2884 513 SUPERFAMILY Cytochrome P450 32 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Tpr4g2884 513 PANTHER CYTOCHROME P450 71B11-RELATED 9 510 - -
Tpr4g2884 513 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2884 513 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2884 Tpr-Chr4 32776312 32778890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2884 4 510 Cytochrome P450 AT4G31500 43.922 3.48e-151 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2884 - - gmx:606704 641.728