Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2870 ATGCAACATCAATCTTCAAACCCTAATCCCAATTCCAATCCCAATCCCAATCCCAATCCTCACAATGCAAACACCGCATCTCAATTACCACCACCAGTGCCACCACCATCCACGACGGCGACAACCTCCGCCGGCAAATCCTCTCTATTCGCTCACTCTAGCGGCAATGCCAGTTCCCATCACCGACGAGCTCACTCGGAAGTCAATTTCCGGTTACCAGATGACATGATGGACTTATCACCGTCCGATCCATTCACCGGTGGCGGATCGTCAACGGCGAGCTTAGATGAGATCGGATCCGAAGACGACCTATTCTCGACGTACATTGATATGGATAAGTTGGGAGACGCCGGAGCAGATCTGGTTGGAAATGATGTGCCGGAGAAGAATCCGGTGAGGCCGAGGCATAGGCATAGTAGTTCGGTTGATGGTTCTTCCTCGTTTGGGGAGATTATGGATGGGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAACTTTGGTCTATTGATCCAAAGCGTGCAAAGAGAATACTTGCAAATCGACAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCCCGTTATATACATGAACTAGAGCGCAAAGTTCAGACCCTGCAGACTGAAGCTACAACTCTTTCTGCCCAACTGACACTATACCAGAGAGACACAACAGGTCTGAGTACTGAAAATACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAAGCACATCTTCGTGATGCTCTTAATGATGCACTGAAGAAAGAAGTTGAGAGGCTGAAAGTTGCTACTGGGGATATAATGAGCCACACTCAATCTTTTAATCTTGGTATGCACCAGATGCAATTTACAGAATCAAATTATGCTCCAATTCCACCACAACCAGGTCCTTCTAATCACCGGAACACCCAGTTACCACTATTTGGTCACTCCCCATCTAGCATGCAATCTCATCAACTGCACCAAACAAATTCTCTTTCATTTTCAGAATTATTGCAAAATGATCAGATTGGTCGATTTCAGGGACTTGACATTAGTAGTAAAGGAACAACTGTTGTAAAGTCTGAAGACCCTTCTCTTTCTGCAAGTGAGAGTAGCACTACATATTGA 1113 0.4591 MQHQSSNPNPNSNPNPNPNPHNANTASQLPPPVPPPSTTATTSAGKSSLFAHSSGNASSHHRRAHSEVNFRLPDDMMDLSPSDPFTGGGSSTASLDEIGSEDDLFSTYIDMDKLGDAGADLVGNDVPEKNPVRPRHRHSSSVDGSSSFGEIMDGKKAMPPDKLAELWSIDPKRAKRILANRQSAARSKERKARYIHELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAHLRDALNDALKKEVERLKVATGDIMSHTQSFNLGMHQMQFTESNYAPIPPQPGPSNHRNTQLPLFGHSPSSMQSHQLHQTNSLSFSELLQNDQIGRFQGLDISSKGTTVVKSEDPSLSASESSTTY* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2870 370 MobiDBLite consensus disorder prediction 39 57 - -
Tpr4g2870 370 Gene3D - 171 245 - -
Tpr4g2870 370 Pfam bZIP transcription factor 172 227 IPR004827 GO:0003700|GO:0006355
Tpr4g2870 370 CDD bZIP_plant_RF2 173 222 IPR044759 GO:0003700|GO:0006355
Tpr4g2870 370 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 367 - -
Tpr4g2870 370 SUPERFAMILY Leucine zipper domain 172 223 IPR046347 GO:0003700|GO:0006355
Tpr4g2870 370 PANTHER ATBZIP TRANSCRIPTION FACTOR 9 367 - -
Tpr4g2870 370 Coils Coil 188 215 - -
Tpr4g2870 370 MobiDBLite consensus disorder prediction 1 80 - -
Tpr4g2870 370 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 233 IPR004827 GO:0003700|GO:0006355
Tpr4g2870 370 MobiDBLite consensus disorder prediction 351 370 - -
Tpr4g2870 370 SMART brlzneu 168 232 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2870 Tpr-Chr4 32531028 32534015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2870 17 369 bZIP Transcription Factor Family AT2G40620 49.383 2.60e-99 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr4g2870 bZIP_1 3.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2870 - - vra:106763153 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3606 3 39978587 39981437 Tpr4g2870 4 32531028 32534015 PCT