Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2862 ATGTTTTGTAAAAGAGAAAATATGGAGGATTTCAAGGAAGAGAATTGTTATGTGGAAACTGACCCAACTGGTCGCTATGGCAGGTTTGGAGATGTTCTTGGGAAAGGAGCAATGAAAACGGTATACAAAGCAATTGATGAGGTTCTTGGAATAGAGGTAGCATGGAACCAAGTTAGACTCAATGAAGTACTTAATACACCCGATGATTTGCAGCGCCTTTACTCGGAGGTTCATCTCCTAAGTACCCTCAAACACCGATCAATCATGCGATTCTACACATCTTGGATTGATATTGATAACAAGAACTTCAACTTTATTACAGAAATGTTCACATCAGGATCACTTAGAGAATACCGGAAGAAATATAAACGAGTAAGCTTACAAGCAATAAAGAGTTGGGCGCGCCAAATCTTACAAGGCCTAGTTTTTCTTCATGGCCATGATCCACCTGTAATTCATAGAGACCTAAAATGTGATAACATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGATCTTGGATTAGCTGCAATTCTTCAAGGTTCTCAATCAGCTCATAGTGTTATAGGTACACCGGAATTCATGGCACCGGAAATGTACGAAGAAGAATACAATGAACTTGCTGATGTGTACTCATTCGGCATGTGTGTATTAGAAATGCTCACATCTGATTATCCATATAGTGAATGTACTAATCCAGCACAGATTTATAAGAAAGTGACATCGGGAAGGCTACCAATGTCATTCTTCCGCATTGAAGATACTGAAGCGCGGAGGTTCATTGGAAAATGTTTAGAGCCTGCAGCAAAGAGACCGTCTGCAAAAGATTTGTTGCTTGAGCCCTTTCTTTTAGCCGATGATTCGTCGTCAGACAAGAAGTTAGCAATTCAGAAGCCATTTTTGAATGACAGTGAGATGGAAAAATTTCAATTAAGAGATGAATTTTCTAAGACTCAAATGAAAGTAATTGGAAAGTTGAATCCTGAAGATGATACTATCTTTCTCAAAGTGCAAATTTCTGATAAAAATTGTTCGGTTAGGAATGTATATTTTCCCTTCGATATTCTAACCGACACGCCAATTGATGTTGCTATGGAGATGGTAAAAGAATTGGAGATTTCTGATTGGGATCCTTATGATATTGCAAATATGATTAATAGAGAGATATCTGCTTTGGTACCACATAGATGGAAAAGTGATTGTTCAGATTCCTTCCATACATTCAATTATCAAGATGATGATGTCGATGAAAATCGTCTGCATTTCCGCTCGTTCTCTTCTAGTTCATCTTTACAAGAATTGATACCGGATTTAGTCAGTAAAAACGAGGAAATATCACACGGATATTATTTGCTCCATGATGATTTACATGATGATAACAGTTCAAGATGCTCTTCACAAGGGACATATTCAAATTGGAACTACTATTCTATGGATGATTATGAACACAATGCAGCTTCAATCCGAAAAGATCCTAAACTTCCTTTAATAAAGAATCACAATAAAGGCACAAGGTTTTGTCCTGGTGAAGAGTTGAACAATTGTAACCAGTATAGAGTTTCAGGAGGATCACAGAATCCTTCACCTAGTAAAGGTAAGATGATGATGGAAAACCGAAAACTGACACGGAACAGGTCATTGATCGATACGCGGAGCCAATTGCTACACAAATCACTTGTTGATGAGTTGAACAAAAGGAGGCAATTCAAGACAGTTGGTTCTGTGGAGAATATTGGATTTCAGTCACCTTATGATGATTCTACAAAATAG 1776 0.3767 MFCKRENMEDFKEENCYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEVLNTPDDLQRLYSEVHLLSTLKHRSIMRFYTSWIDIDNKNFNFITEMFTSGSLREYRKKYKRVSLQAIKSWARQILQGLVFLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILQGSQSAHSVIGTPEFMAPEMYEEEYNELADVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSGRLPMSFFRIEDTEARRFIGKCLEPAAKRPSAKDLLLEPFLLADDSSSDKKLAIQKPFLNDSEMEKFQLRDEFSKTQMKVIGKLNPEDDTIFLKVQISDKNCSVRNVYFPFDILTDTPIDVAMEMVKELEISDWDPYDIANMINREISALVPHRWKSDCSDSFHTFNYQDDDVDENRLHFRSFSSSSSLQELIPDLVSKNEEISHGYYLLHDDLHDDNSSRCSSQGTYSNWNYYSMDDYEHNAASIRKDPKLPLIKNHNKGTRFCPGEELNNCNQYRVSGGSQNPSPSKGKMMMENRKLTRNRSLIDTRSQLLHKSLVDELNKRRQFKTVGSVENIGFQSPYDDSTK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2862 591 Gene3D - 316 401 - -
Tpr4g2862 591 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2862 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Tpr4g2862 591 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 590 - -
Tpr4g2862 591 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 6 590 - -
Tpr4g2862 591 CDD STKc_WNK 25 285 - -
Tpr4g2862 591 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2862 591 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Tpr4g2862 591 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2862 591 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Tpr4g2862 591 SUPERFAMILY Protein kinase-like (PK-like) 28 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2862 Tpr-Chr4 32372651 32376978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2862 17 591 MAP Kinase Kinase Kinase AT5G58350 56.432 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr4g2862 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2862 K08867 - gmx:100272203 917.146