Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2861 ATGGGAAACAATAAGTTCAAATTTTCAGATATGATACCAAATGCATGGTTTTACAAGCTTAAAGATATGAGCAAATCATCAAGGAAAAGAAATGGTTCACAATCTCATCATGTTATGAAGAACAAAGTAATGACTTCACCAACAACATCTCAAAGGTCACAACAATATTCAAGGTATTCTTCACATCATTTCTCAAATGAACAAACAAAAGCTTATAATAAAATATTGAACTCACCAATTCACACCAAAGATTTGAACCTTCCATTCAATGATTCACCAAGAAAGTCTTCAAAGAGAAAGACTAGAAGAAAAACTATTTACAAGCCTTCTCAACATGATGATGATGATTTGTCTTCAATTGAAAATTCTTCTTCCGAGTCTTATCATAATCAATGTGTTTCTTCTGAATCTGAATTTTGTGATAGCTTTTCGGTTCCGGATTTGCTTAATTGTAGTTGTAGAGTTAGCTCTTCAACTAATGATATAATCATAGACATGAACAATGAATCTTTTCAAGGAAATTCTAAATATTTAGATGGTTTTGATGCATTTTCACAACATGGTTTAGCTCCAATATTGACAAAGCAAGTTAAGTTTGATGATAAGATCGAATCTCGAAGTTCAACCGAATCCGAAGAAAATATTAATAGAACTCAAAGAAGGAGGAAAAAAAGTCAAATAGGTAAAAAAGGTTCTCCAAATTCTCAAGGTATTAAGCTTAGAGTGAATTCTCCAAAACTTGTTAACAAAAAAATTCAAGCTTATGGAAGAAAGAGTGTTTCATCATCATTATCAAGTGGAAGCAAAGTTTCAAGGAATGATGGAGGGTTTGTAGATGGATTTGCAGTTGTTAAGTCTTCAATTGATCCAATAAGTGATTTTAAGGAATCAATGGTGGAAATGATTGTGGAGAATAATATAAGAGGATCAAAGGATTTGGAGAATTTACTTGCTTGTTATCTTTCTCTTAATTCAAGTGAATATCATGATGTTATTGTTAAAGCTTTTGAGCAAATTTGGTATGACATGGCTCAACTTAGAATGTAA 1047 0.3142 MGNNKFKFSDMIPNAWFYKLKDMSKSSRKRNGSQSHHVMKNKVMTSPTTSQRSQQYSRYSSHHFSNEQTKAYNKILNSPIHTKDLNLPFNDSPRKSSKRKTRRKTIYKPSQHDDDDLSSIENSSSESYHNQCVSSESEFCDSFSVPDLLNCSCRVSSSTNDIIIDMNNESFQGNSKYLDGFDAFSQHGLAPILTKQVKFDDKIESRSSTESEENINRTQRRRKKSQIGKKGSPNSQGIKLRVNSPKLVNKKIQAYGRKSVSSSLSSGSKVSRNDGGFVDGFAVVKSSIDPISDFKESMVEMIVENNIRGSKDLENLLACYLSLNSSEYHDVIVKAFEQIWYDMAQLRM* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2861 348 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Tpr4g2861 348 MobiDBLite consensus disorder prediction 83 122 - -
Tpr4g2861 348 Pfam Transcriptional repressor, ovate 287 343 IPR006458 -
Tpr4g2861 348 MobiDBLite consensus disorder prediction 201 240 - -
Tpr4g2861 348 MobiDBLite consensus disorder prediction 24 64 - -
Tpr4g2861 348 PANTHER TRANSCRIPTION REPRESSOR OFP3 3 347 - -
Tpr4g2861 348 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 347 IPR038933 GO:0045892
Tpr4g2861 348 ProSiteProfiles OVATE domain profile. 283 342 IPR006458 -
Tpr4g2861 348 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 281 343 IPR006458 -
Tpr4g2861 348 MobiDBLite consensus disorder prediction 201 220 - -
Tpr4g2861 348 MobiDBLite consensus disorder prediction 37 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2861 Tpr-Chr4 32367189 32368425 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr4g2861 Ovate 7.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2861 - - cam:101489571 419.468