Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2854 ATGTCGGAGATTGAACAAGCACCACCAGCTCCGGCGGAAACCACCGCGTTATTCGAAAAATACGAGATCGGAAAACTCCTCGGATGCGGCGCGTTTGCGAAAGTATATCACGCGCGGAACATGGAAAATGGACAAAGTGTTGCTGTGAAAGTAATCAACAAGAAGAAAGTCACAGCAACTGGTCTCGCTGGAAACGTGAAACGTGAAATCTCGATTATGAGTCGTCTTCGTCATCCGAATATTGTTAAGCTTCATGAAGTTCTTGCTACGAAAACTAAGATCTATTTTGTTATGGAATTTGCTAAAGGTGGTGAACTTTTCGCGAAAATCGCGAGTAAAGGAAGGTTCAGTGAAGATCTATCTAGGAGGCTTTTTCAACAGCTGATTTCTGCTGTTAGTTATTGTCATTCTCATGGTGTTTTTCATCGTGATTTGAAACCGGAAAATCTATTGCTTGATGATAAGGGGAATTTGAAGGTTTCGGATTTCGGATTAAGTGCAGTGAAAGAGCAAATTCGTGTGGATGGAATGTTACACACGCTTTGCGGAACACCTGCTTACGTGGCACCGGAGATTTTGGCGAAGAGAGGTTATGATGGAGCTAAGGTGGATGTTTGGTCGTGTGGTATTATTCTATTTGTTCTCGTAGCTGGTTATCTTCCATTTAACGATCCAAATTTGATGGTGATGTATAGGAAGATATATAGTGGAGAATTTAAGTGTCCACGTTGGTTTTCACCGGATCTACGGCAGTTTTTATCGCGGTTGTTGGATACGAAACCTGAGACGAGGATAACCGTTGAGGAGATTACCCGGGATCCTTGGTTTAGAAAAGGGTATAAGGAGGTGAAGTATCATGAAGAGGGGGTCGGACTTGGGGAGAAGGTTAATGGGGAAGAAGAAAGTAAAACAATGGATTTGAATGCGTTTGATATTATATCATTTTTCTCTTCAGGGTTGGATCTTTCAGGGTTTTTTACGGATATGGAAGGGGAGAGATTCGTGCTGACGGAGTCATTGGAGAAGGTTGTTGAGAAGGTGGTGGCGGCAGCAAAGGCAGAGGGGTTAGTGGTGAGAAAGAAGAAGGAATTTGGGGTGGAGATTGAGACCCAAAACGGGGGTTTGGTCATTGGGGTTGAGATTTACCGATTATTGGCTGAGGTGGTTGTGGTTGACGTGAAGAGGTTTGGTGGGGACGAGGTTGCTTTTGATGAAGTGTGGAAGTATAAGTTGAGACCCCGCTTGTGTGATGCAACGACATCGCAACAAGACCAAACTCAGTCTCATGCGGCTGTCTCTGCTGAATAA 1308 0.4411 MSEIEQAPPAPAETTALFEKYEIGKLLGCGAFAKVYHARNMENGQSVAVKVINKKKVTATGLAGNVKREISIMSRLRHPNIVKLHEVLATKTKIYFVMEFAKGGELFAKIASKGRFSEDLSRRLFQQLISAVSYCHSHGVFHRDLKPENLLLDDKGNLKVSDFGLSAVKEQIRVDGMLHTLCGTPAYVAPEILAKRGYDGAKVDVWSCGIILFVLVAGYLPFNDPNLMVMYRKIYSGEFKCPRWFSPDLRQFLSRLLDTKPETRITVEEITRDPWFRKGYKEVKYHEEGVGLGEKVNGEEESKTMDLNAFDIISFFSSGLDLSGFFTDMEGERFVLTESLEKVVEKVVAAAKAEGLVVRKKKEFGVEIETQNGGLVIGVEIYRLLAEVVVVDVKRFGGDEVAFDEVWKYKLRPRLCDATTSQQDQTQSHAAVSAE* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2854 435 Pfam Protein kinase domain 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2854 435 CDD CIPK_C 308 416 - -
Tpr4g2854 435 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 422 - -
Tpr4g2854 435 SMART serkin_6 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2854 435 Gene3D Phosphorylase Kinase; domain 1 17 102 - -
Tpr4g2854 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Tpr4g2854 435 Pfam NAF domain 307 360 IPR004041 GO:0007165
Tpr4g2854 435 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165
Tpr4g2854 435 SUPERFAMILY Protein kinase-like (PK-like) 18 286 IPR011009 -
Tpr4g2854 435 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Tpr4g2854 435 Gene3D Kinase associated domain 1, KA1 303 419 - -
Tpr4g2854 435 PANTHER - 1 422 - -
Tpr4g2854 435 Gene3D Transferase(Phosphotransferase) domain 1 103 283 - -
Tpr4g2854 435 ProSiteProfiles Protein kinase domain profile. 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2854 Tpr-Chr4 32295153 32297388 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2854 1 421 CBL-interacting serine-threonine protein kinases AT2G30360 62.818 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr4g2854 Pkinase 2.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2854 - K12761 gmx:100813555 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3618 3 40204957 40206882 Tpr4g2854 4 32295153 32297388 PCT