Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2843 ATGAAGGGAAAACCAGATGCATATAGTCTACTTTCATGTGCTGCTTTTGCTATCATGTCACTGAGTTTGTCGCGGGAAACTCAGTCCGGATTCAAAATCGATCTTATATATTTTTTCCTCGGAAGTCTAATTCTGCAACTCATGAAGATTAAATTGCTATTATGCATTCCAGGAGTAGGTTTCGGTTACTTAATTTTTATTCTTCGTTCTCATTTCTCTTCTATAAATGATGCAATTCAAGCCGAGTCACATTCACAACAATTGGTCAGTACTATTGATAATGACGATCCCACTAGTCTTCAAGATGAAAATCTGAATGTTATTGTCGATCCACATTCAACACAACTGCCCAGTACTAGTACTGCTGATATTGGAGGTAGTATGCTGGAAAAAATTAGTGATTGTGTGAAGGCACTTCGGCGAGAAAATTCAACTCTCATGGAAATGCTTATGGAAAAGTTGAAAGATTACCTTAGTGACGATTCTGGATTTAATGTGTCTGACCCAGACTTCATGATCATGGCCTTGTCAACTGAAACAATCGACAACCTTCACAAAACAGCCAAGTTGATGGTTCGTGCTGGGTTAAAGTGTGAACTCTCCGACGTATATACCAGTTCCCGGAGGGAATATTTGGTCGAAAGCCTCTCAAGATTAGGGTTCAAGAAACTCAGCATTGAAGACCTTCAGATGTTGTCATGGAAAGAAATTGAAGATGAGATTAAAAGATGGATCAAAGCTTCCAACGTGGCTTTGAAGATATTGTTACCCGCCGAACACAAACTCTTCGATCAGGTTTTCTTTGGATTCTCCTCCACTGCTGATTTATCGTTTATGGATGTTTGCAGGGAATCCACACTTCAGCTGCTGGATTCCGCTGATACTATCGCCATAGGAAGTCGATCACCTGAGCGGTTGTTTAGAGTCCTCGACATGTTTGAAACAATGCGTGACCTAATAATTCCAGAGTTTGAGTCTTTGTTCCCTTATCAATACAGTGGATCCCTGCAAATCGAAGCAATGGCAACTTGCAAGAGATTGGGGGAAGCAATCAGAGGCATTTTCATAGAGTTTGGGAATCAGATTTCGCAAGATTCAACGGAGGAAATATATCAGAAAGATGAACTTCCCTCGATCACCAGTTACGTGATGGATCATCTCTGTGCTGCTAGTCGGTCACGGAAGACCTTGGAGCAAGTGTTCGACGGAGATTATGGGGATCCATTGAAGGAATATCCTAAAATTGAGGATAGAGTGCATTCCTGTTCCGATCTCTCAGTACAGATGGGTTTGATTATGAAGCTATTATGGAACAAGTTGGCCGCTATAGCCAAATACCATGAAAATGTATTGATATATAACAAGTTACCTCTGTGGCACTCTGGTTTCTTGATGACAAACAGGAAGTACATTGCTCAAAAAGCTGAAGATAGTGAATTAGGAGCTATTTTAGGAGATAACTGGTTCATCAATAATCTACCTGGCCTATTTCCCTCACATCCCATTGATTTAAATGAGTTGGCAGACATAAACGTTTTTTTGCCAGGAGTAGGTTTCGGTTACTTGATTATTCTTTGTTCTCATTTCTCTTCTATAAATGATGCAATTCAAGCTGAGTCACATTCACCACAATTGCTCAGTACTACTGATAATGGATATCTTACTAGTCTTCAAGATCAAAATCTGAACGTTATCGTCGATCAACATTCACCACAGCTGGCCATTACTTATATCGGAAGTAGTATTCTGAAAAAAACTAGTGATTATGTGAAGGCACTTCGGCAAGCAAATTCAACTCTCTTCGAAATGCTGATGGAAAAGTTGAAAGATTACCCTAGTGATGATTCTGGATTAGTGGATTTAATGTGTCTGACACCGACTTCATGA 1887 0.399 MKGKPDAYSLLSCAAFAIMSLSLSRETQSGFKIDLIYFFLGSLILQLMKIKLLLCIPGVGFGYLIFILRSHFSSINDAIQAESHSQQLVSTIDNDDPTSLQDENLNVIVDPHSTQLPSTSTADIGGSMLEKISDCVKALRRENSTLMEMLMEKLKDYLSDDSGFNVSDPDFMIMALSTETIDNLHKTAKLMVRAGLKCELSDVYTSSRREYLVESLSRLGFKKLSIEDLQMLSWKEIEDEIKRWIKASNVALKILLPAEHKLFDQVFFGFSSTADLSFMDVCRESTLQLLDSADTIAIGSRSPERLFRVLDMFETMRDLIIPEFESLFPYQYSGSLQIEAMATCKRLGEAIRGIFIEFGNQISQDSTEEIYQKDELPSITSYVMDHLCAASRSRKTLEQVFDGDYGDPLKEYPKIEDRVHSCSDLSVQMGLIMKLLWNKLAAIAKYHENVLIYNKLPLWHSGFLMTNRKYIAQKAEDSELGAILGDNWFINNLPGLFPSHPIDLNELADINVFLPGVGFGYLIILCSHFSSINDAIQAESHSPQLLSTTDNGYLTSLQDQNLNVIVDQHSPQLAITYIGSSILKKTSDYVKALRQANSTLFEMLMEKLKDYPSDDSGLVDLMCLTPTS* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2843 628 Gene3D Exocyst complex component Exo70 126 493 - -
Tpr4g2843 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 489 IPR004140 GO:0000145|GO:0006887
Tpr4g2843 628 SUPERFAMILY Cullin repeat-like 143 489 IPR016159 -
Tpr4g2843 628 Pfam Exo70 exocyst complex subunit 242 489 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2843 628 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 1 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2843 Tpr-Chr4 32175638 32177822 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2843 166 476 EXO70 exocyst subunit family AT5G58430 53.205 1.41e-93 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2843 K07195 - cam:101500706 387.497