Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2841 ATGGCGGGCAAACGAGAGCTTGTGCTAGGTATCTGTGCCCCGGGAATTGTTGAGGTTCCGCCTGATAAACCTCCATCTAGACCTGTTGCATATGAGATTGATACATCGGATCATTTTTACACTGAAATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGGCTCGGGAGATTGCCTTAAAGCTAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGGCAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTCTGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACCGTTGTAAACGGAAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGAAAGAAAGGCAATGTATGGAGGAAATGTAA 489 0.4622 MAGKRELVLGICAPGIVEVPPDKPPSRPVAYEIDTSDHFYTEMATPDRDELIRWAREIALKLKFAIVIGKSDNGSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLCGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPKERQCMEEM* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2841 162 Pfam Transcription factor AFT 88 138 IPR014842 GO:0000981|GO:0036086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2841 Tpr-Chr4 32166913 32167401 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g2841 AFT 1.3e-05 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2841 - - mtr:MTR_1g099140 122.094