Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2834 ATGGGTTCTCGTATCCAATTTTATCTTGTGATTTTTATGGTCACTTTAGCAACAATTTTGAGCCCTACACTAGCAAAGCTCACTCCTAATTATTATGATAGAGTTTGTCCTAAGGCATTGCCAATCATAAAGTCACTTGTTAAGCAAGCAATTTATCGCGAACCACGCATTGGAGCATCATTACTACGTTTGCATTTTCATGATTGCTTTGTTAATGGGTGTGATGCATCAGTTCTACTGGATGATACCCCTACCTTCCTGGGTGAGAAGACTGCATTTCCAAATAATAATTCAATTAGAGGTTTTGAGGTTGTTGATCAAATTAAAGCCACCGTTACCAAAGCTTGCAAACGCGATGTTGTATCATGTGCAGATATTTTAGCTATAGCAGCTAGAGATTCTGTAACCATACTTGGTGGAAACCAATATTGGTACCAAGTGTTACTAGGAAGAAGAGATGCAAGAAATGCAAGTTGGGCTGCAGCAAATGCAAATCTTCCACCACCATTTTTCAACTTGTCACAACTCATCACAAGTTTTAAATCTCATGGACTTAACCTTAAAGACTTAGTTGTTCTATCTGGTGCTCACACAATTGGATTTGCCAAATGCAGTTCATTTAGGGACAGAATCTTCAATGACACTAACATTGACAATAATTTCGCGGCCAATTTACGCAACACTACATGTCCTCGAATTGGTGGCGACACCAACTTAGCACCGTTTGATTCTACTCCTACAAAAGTTGACACAACATACTATAAAGGTTTGTTGTACAAAAAGGGTCTACTTCATTCTGATCAAGAGCTTTACAAAGGTGATGGTTCTCAAAGTGATAGATATGTGAAGCTATATAGTAAAAATTCTTATGCTTTTGCTAAAGATTTTGGAGTTTCTATGATTAAGATGGGAAACTTGAAGCCTCTTACTGGGAGAAAGGGTGACATAAGGTGCAATTGCAGAAAAGTCAACAATTATTGA 981 0.3772 MGSRIQFYLVIFMVTLATILSPTLAKLTPNYYDRVCPKALPIIKSLVKQAIYREPRIGASLLRLHFHDCFVNGCDASVLLDDTPTFLGEKTAFPNNNSIRGFEVVDQIKATVTKACKRDVVSCADILAIAARDSVTILGGNQYWYQVLLGRRDARNASWAAANANLPPPFFNLSQLITSFKSHGLNLKDLVVLSGAHTIGFAKCSSFRDRIFNDTNIDNNFAANLRNTTCPRIGGDTNLAPFDSTPTKVDTTYYKGLLYKKGLLHSDQELYKGDGSQSDRYVKLYSKNSYAFAKDFGVSMIKMGNLKPLTGRKGDIRCNCRKVNNY* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2834 326 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PANTHER CATIONIC PEROXIDASE 6 324 - -
Tpr4g2834 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Tpr4g2834 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Tpr4g2834 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 PANTHER PEROXIDASE 72-RELATED 6 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2834 326 Gene3D - 30 321 - -
Tpr4g2834 326 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601|GO:0042744
Tpr4g2834 326 Gene3D Peroxidase, domain 2 167 303 - -
Tpr4g2834 326 Pfam Peroxidase 44 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2834 Tpr-Chr4 32084505 32086711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2834 25 324 Peroxidase AT5G05340 55.116 2.19e-112 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2834 K00430 - gmx:100810852 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2834 4 32084505 32086711 Tpr4g2834 4 32084505 32086711 ECH