Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2826 ATGGAATCCCAAAATATAGAGCATGTTTCTTCTAATTTGCTCAAAGCTCAGAGCCACATATGGAATCACATTTTCAATTTCATAAATTCCATGTCACTTAAATGTGTTGTTGATTTAGGCATAGTAGATATTATACACAATCATGGAAAACCCATGCCACTTTCAAAACTCATTTCTTCACTATCAATCCATCCTACAAAAAACGACAATATCTATCGCTTGATGCGAATCATGACTCACTCTGGCTTCTTTTCTCAACAAAATATTACACTAGAGAATGAGCTAGAAATTGAGTATACGTTAACTGATGCATCTCGATTACTACTCAAGGATAACCCAATGAGTATGACACCATTCGTGCAAGCGATGCTCGATCCGGTTTTGACAAATCCGTGGCATCAATTGTCTACTTGGTTAAAAAACGACGATCCTACAACGTTTGAAACAACACACAAGATGCTAATGTGGGATTATGCTGCCCGTGACTCCAATTTTAACAACTTATTCAACGAGTCCATGGCAAGTGATGCTCGATTAGTGATCAATTTGTTGATCGAGAAGTATAGGGAAGTATTCATTGGATCAAAGTCATTGGTCGATGTTGGAGGAGGCACAGGGACCACGGCAAAGGCTCTTGCCAAATCATTCCCTCAATTAGAGTGTGTTGTGTTTGATCTCCCACATGTTGTCGCTGGCTTGCAAGGAAGTGATAATCTAAAATATGTTGGTGGAGACATGTTTAAAGAAATTCCTCCGGCAGATGCCATCTTGATGAAGTGGATATTGCATAGTTGGAATGATGAGAAATGTGTGAAACTATTGAAGAAATGCAAGGAATCACTCAAACATAAAGGTAAAGAAGGAAAGGTGATTATCATAGATATGGTGTTGGACATTGACCAAAAGGGAGACAATGACATTACTAAATCAACTGAAACACAACTCTTCTTTGATATGTTGATGATGGTAGTTGTCACTGGAAAAGAGAGAAACGAAAAAGAATGGAGTAATTTGATTTACTCTGCAGGTTTTTGTGGATATAAGATAACTCCAATTTTAGGCTTAAGGTCTGTGATTGAGATCTATCCCTAA 1092 0.3782 MESQNIEHVSSNLLKAQSHIWNHIFNFINSMSLKCVVDLGIVDIIHNHGKPMPLSKLISSLSIHPTKNDNIYRLMRIMTHSGFFSQQNITLENELEIEYTLTDASRLLLKDNPMSMTPFVQAMLDPVLTNPWHQLSTWLKNDDPTTFETTHKMLMWDYAARDSNFNNLFNESMASDARLVINLLIEKYREVFIGSKSLVDVGGGTGTTAKALAKSFPQLECVVFDLPHVVAGLQGSDNLKYVGGDMFKEIPPADAILMKWILHSWNDEKCVKLLKKCKESLKHKGKEGKVIIIDMVLDIDQKGDNDITKSTETQLFFDMLMMVVVTGKERNEKEWSNLIYSAGFCGYKITPILGLRSVIEIYP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2826 363 Gene3D - 2 108 IPR036388 -
Tpr4g2826 363 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Tpr4g2826 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 363 IPR016461 GO:0008168
Tpr4g2826 363 PANTHER O-METHYLTRANSFERASE 8 363 IPR016461 GO:0008168
Tpr4g2826 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Tpr4g2826 363 Gene3D Vaccinia Virus protein VP39 109 363 IPR029063 -
Tpr4g2826 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 361 IPR029063 -
Tpr4g2826 363 Pfam O-methyltransferase domain 132 344 IPR001077 GO:0008171
Tpr4g2826 363 PANTHER O-METHYLTRANSFERASE 8 363 - -
Tpr4g2826 363 SUPERFAMILY "Winged helix" DNA-binding domain 10 113 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2826 Tpr-Chr4 31987606 32020509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2826 31 349 Monolignol Biosynthesis Gene Families AT5G54160 34.356 4.54e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2826 - K16040 gmx:100781008 517.309