Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2815 ATGGCTGAAACTAGAGTAAATGCAAGCATTACCGATGTTACAAATAATGGAACAATATGGATATGTGAACACATGTTCAGGTATCAAAGGTCAAAAGGAATTTTCTTTTATGATAATCCATTTAGTTTCACATTGCCAGTGCTTTTTCTTCAAACAACCTTAGTTTCTGTCTCTACCACAACTTTACAGCTTATACTTGAACCAATTGGGACGAGTAGTTTCTTTCCACAACTGCTGGCAGGCTTGGTACTAGGACCATCCGTTATTGGACAAAATGAGTTCATAAAAAAATGGCTATTCCCACCAAAAACATTCTACATAAGTGAGACAATTGCATTTTTTGGGAGCATGATGTATATGTTCTTAATTGGAGTAAAAATTGATATAAGTAGTGTTACAAGAACAGGGAAAAAAGCTTGGGCAATTGGAATATTTTCATTTATTATACCACTAATGTTAAGCTTATTAATTGCACTTTTTCTAAGAAAAACATTATTAACCCCCGACAAAGGTCTCTACGAGTCTATATTTTCCATTGTATTTATCTTTTCAACGGGTTCATTTCACGTCACTACAATTCTCTTAGCCGATTTAAAATTATTAAGCTCCGAAATGGGGCGATTAGCAATTTCTTCATCCTTGATAAGTGGATTCATTTCGATATTGTGGGTTACGTGTTTGTCAACATTGAAACAATCAGAAACAAAGAAAGACAACGGTCCTTTTAATTGGATGACAATGTCTTTCATCGTTATGATTCTCGTCATCATATATGTTCTACGACCGATAATGTTATGGATGATACGAAAAACACCTGAAGGAAAACCGATCAAAGAATCGTACATATTTTCGGTATTTTTAATGGTATTAAGCTGCGCATTATTTGGCGAATATATAGGACAACATTTTATGATTGGGCCTATTGTTTTTGGTATGGCTGTACCTGATGGTCCTCCATTAGGGTCTGCATTGACTGAAAAATTGGATGCATTGGTGTCAACAATTTTTTTGCCATTGTATTTTCTTTATAGTGGTATTAGATTTGATCTTTATATAATTGATGCTCAAAGCTTTGCAATTGTGCAAGTTGTTGGTATAGTTTCAAGCATTGGGAAGATTGTAGGAACTTTGTTGCCTTCAATTTATTGGAAGATGCCATTTACAGATGTACTATCTTTAGGACTACTTATGAGTACTCAAGGCATCACACAATTGCTTTACTTGCAGTCTTCTCTACACCTTAATATTATAGATGAACAGTCATATGGCAATGCATTGATAGCTCTACTATGGTTGACAGGAGCTACAACACCAATTATAAAATTCCTATATGAGCCATCTAAGAGGTACTTGTCTTTAAATAGAAGAACCATTGAACAATCAACTTCAGATATTGAATTACGTCTCATGGCATGTATACACACTCAAGATGACACATCATCCATAATCAATCTTCTTGAAATGTCAAACCCTTCATTGGAAAATCCAATTTGTTTCTATGTCTTACATCTACTTCAACTAAAAGGAAGATCTGCACCTCTTTTTATAGATCATCAACCATCAAGCAAAAAGTTGAATGCACCGCATTCAAATCATTCTCAAAACATAATAAATGCCTTTAGATCGTATGAGAAACAAAAATCAAACAATGTGGTTGTCAAAGTCTTCACAACGATCTCGCCTTATGAGACGATGCACGATGAGATATGTATGCAAGTTGATGAGAAAAGAGTTTGTTTGTTGATCGTGCCTTTTCATAGACAATGGAGACCAACCGGGGTTACAGAATCGGCTCAGCCTATTCGAGCCTTAAATCGTCATCTTCTCAGAATGGCACCTTGTTCAGTTGGGATTCTAATCGAACGCGGCACTTTGTGTAGGAACAACCCTTTAACATCTGTCTTGTTTTATAGTGTTGGAATAGTTTTTATAGAAGGAGCCGACGATCGCGAAGCGTTAGCTTACGCGATGCGAATGGCTAATCATCCGAATGTCAGGATAACCCTAGTTCGATTAATGGAACCTCGAAAGAAAAATAGGAACTTAATGCATCGGGATCCAGATGGCGATTTAATTCATAGGTTTAAAGTGGAGTGTATTCAAATTAAACGACACGATTATCGAGAGGAAATCGTAAGAGATAGTGTTGAAATGATAAATGTAATAAGGTCACTTGATGGTTGTTTTGATTTGGTTTTGGTTGGTAGAAGACATGCAACTGAATCAAATTTGTTTAGTGGATTAACTGAATGGAATGAGTTTCCAGAACTTGGTCCTATTGGAGACATGTTAGTGGCTTCTGATTCTACTTTTGATGGTTCAGTTTTGGTGATTCAACAACAAAAGAGATCAGGGGTTGGTTATCATGATTTGAGTTTAGATTCAGGTATCAATACAATGCAAGAATCAATAACAATTGTGGAAGTACCTCGTGAGAGAAAGGTGTGGCCAATTGCTTAA 2460 0.3593 MAETRVNASITDVTNNGTIWICEHMFRYQRSKGIFFYDNPFSFTLPVLFLQTTLVSVSTTTLQLILEPIGTSSFFPQLLAGLVLGPSVIGQNEFIKKWLFPPKTFYISETIAFFGSMMYMFLIGVKIDISSVTRTGKKAWAIGIFSFIIPLMLSLLIALFLRKTLLTPDKGLYESIFSIVFIFSTGSFHVTTILLADLKLLSSEMGRLAISSSLISGFISILWVTCLSTLKQSETKKDNGPFNWMTMSFIVMILVIIYVLRPIMLWMIRKTPEGKPIKESYIFSVFLMVLSCALFGEYIGQHFMIGPIVFGMAVPDGPPLGSALTEKLDALVSTIFLPLYFLYSGIRFDLYIIDAQSFAIVQVVGIVSSIGKIVGTLLPSIYWKMPFTDVLSLGLLMSTQGITQLLYLQSSLHLNIIDEQSYGNALIALLWLTGATTPIIKFLYEPSKRYLSLNRRTIEQSTSDIELRLMACIHTQDDTSSIINLLEMSNPSLENPICFYVLHLLQLKGRSAPLFIDHQPSSKKLNAPHSNHSQNIINAFRSYEKQKSNNVVVKVFTTISPYETMHDEICMQVDEKRVCLLIVPFHRQWRPTGVTESAQPIRALNRHLLRMAPCSVGILIERGTLCRNNPLTSVLFYSVGIVFIEGADDREALAYAMRMANHPNVRITLVRLMEPRKKNRNLMHRDPDGDLIHRFKVECIQIKRHDYREEIVRDSVEMINVIRSLDGCFDLVLVGRRHATESNLFSGLTEWNEFPELGPIGDMLVASDSTFDGSVLVIQQQKRSGVGYHDLSLDSGINTMQESITIVEVPRERKVWPIA* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2815 819 Pfam Sodium/hydrogen exchanger family 54 436 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr4g2815 819 Gene3D - 47 451 IPR038770 -
Tpr4g2815 819 PANTHER CATION/H + ANTIPORTER 16 818 - -
Tpr4g2815 819 PANTHER CATION/H+ EXCHANGER 2 16 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2815 Tpr-Chr4 31727857 31731617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2815 31 811 Antiporter Super Family AT2G13620 35.229 3.64e-165 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2815 - - mtr:MTR_5g074380 1200.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2815 4 31727857 31731617 Tpr4g2815 4 31727857 31731617 ECH