Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g2812 | ATGCCCATAAGAATTCCCAATAGACTAATACAGAAAAAGCTATGGAGAATATTAGGATTTTTTTCAAGTATCATTGGACTCATTTCTTATGCAATAAGCTCTTCTTTCAATCAACTTTTTGGAAATTGGAACTTCATCAAAATCATTATCTACACAGTGGTAAGTTTCAGTATCACTAGCATGATGTTATTTTTGGAAAAATGGAAACTTTCAAGGAGATTCTTGCTAAAAGCTCATTTAGGTGTTCTTGTTTTGTTACTCGCATCATTTTACAGTTTTGTATCCGATTATAAAACTTTGAATCAAAAACCAGACTTATTGAGTCTTATTTCTTGTTCATCTTTTGCTTTAATGTGTTTTTGTTTATCAAGACAAATTGATCTTGGTTTTGAATCTGATCTTCTTAATTTCTTCCTTGGAATGCTTACTATTCATTTGATGAAAATCAATTTGATGTTATCTATAATTGCTGCAATCTTCTGTTATTCTCTTATGGTTCTTCGTTCGAAATTAGATTCTCGACACGAAATTGGAACATTAAGAGTAGAAGATGATGTAGCTATAGAAATTGATGCTGTAGATAGAAACAAAAATGAGTTCCAATCTTTAAGAAGAAGAATGAATAATAATGATGGTTATAATTGGAAAAGATATGAAGAAAAATTTGCAAAAGGAAGTGAAAATCAGAGAAGTTACTATAAATGTGTGGGGTCTAATTGTGTTGTGAAGAAAAGAGTTGAAAGAAATATTGATGGTGAAATTATTGAGACACTATATAAAGGTACACATAATCATTGCATGCCTACTGAGTCTACAATGAAGAAGAATTCATCATCTGAATATCTTTATTCACTTTTGCCTTTAGAAACTGGCTCTATTGATTTTCCAGATCAATCATTTGGTAGTGAACAATTGGATTCTGATGAAGAACTTTCAAATTTCTCAGTAGTATCAGTATGA | 960 | 0.3031 | MPIRIPNRLIQKKLWRILGFFSSIIGLISYAISSSFNQLFGNWNFIKIIIYTVVSFSITSMMLFLEKWKLSRRFLLKAHLGVLVLLLASFYSFVSDYKTLNQKPDLLSLISCSSFALMCFCLSRQIDLGFESDLLNFFLGMLTIHLMKINLMLSIIAAIFCYSLMVLRSKLDSRHEIGTLRVEDDVAIEIDAVDRNKNEFQSLRRRMNNNDGYNWKRYEEKFAKGSENQRSYYKCVGSNCVVKKRVERNIDGEIIETLYKGTHNHCMPTESTMKKNSSSEYLYSLLPLETGSIDFPDQSFGSEQLDSDEELSNFSVVSV* | 320 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g2812 | 319 | ProSiteProfiles | WRKY domain profile. | 209 | 268 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr4g2812 | 319 | Pfam | WRKY DNA -binding domain | 210 | 265 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr4g2812 | 319 | Gene3D | WRKY domain | 194 | 269 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr4g2812 | 319 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 3 | 274 | IPR044810 | GO:0003700 | |
Tpr4g2812 | 319 | PANTHER | WRKY FAMILY TRANSCRIPTION FACTOR | 3 | 274 | - | - | |
Tpr4g2812 | 319 | SUPERFAMILY | WRKY DNA-binding domain | 206 | 268 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr4g2812 | 319 | SMART | WRKY_cls | 209 | 267 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g2812 | Tpr-Chr4 | 31688773 | 31690122 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g2812 | 210 | 293 | WRKY Transcription Factor Family | AT2G38470 | 38.824 | 1.16e-12 | 66.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tpr4g2812 | WRKY | 1.5e-17 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g2812 | - | - | ccaj:109792596 | 366.696 |