Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2812 ATGCCCATAAGAATTCCCAATAGACTAATACAGAAAAAGCTATGGAGAATATTAGGATTTTTTTCAAGTATCATTGGACTCATTTCTTATGCAATAAGCTCTTCTTTCAATCAACTTTTTGGAAATTGGAACTTCATCAAAATCATTATCTACACAGTGGTAAGTTTCAGTATCACTAGCATGATGTTATTTTTGGAAAAATGGAAACTTTCAAGGAGATTCTTGCTAAAAGCTCATTTAGGTGTTCTTGTTTTGTTACTCGCATCATTTTACAGTTTTGTATCCGATTATAAAACTTTGAATCAAAAACCAGACTTATTGAGTCTTATTTCTTGTTCATCTTTTGCTTTAATGTGTTTTTGTTTATCAAGACAAATTGATCTTGGTTTTGAATCTGATCTTCTTAATTTCTTCCTTGGAATGCTTACTATTCATTTGATGAAAATCAATTTGATGTTATCTATAATTGCTGCAATCTTCTGTTATTCTCTTATGGTTCTTCGTTCGAAATTAGATTCTCGACACGAAATTGGAACATTAAGAGTAGAAGATGATGTAGCTATAGAAATTGATGCTGTAGATAGAAACAAAAATGAGTTCCAATCTTTAAGAAGAAGAATGAATAATAATGATGGTTATAATTGGAAAAGATATGAAGAAAAATTTGCAAAAGGAAGTGAAAATCAGAGAAGTTACTATAAATGTGTGGGGTCTAATTGTGTTGTGAAGAAAAGAGTTGAAAGAAATATTGATGGTGAAATTATTGAGACACTATATAAAGGTACACATAATCATTGCATGCCTACTGAGTCTACAATGAAGAAGAATTCATCATCTGAATATCTTTATTCACTTTTGCCTTTAGAAACTGGCTCTATTGATTTTCCAGATCAATCATTTGGTAGTGAACAATTGGATTCTGATGAAGAACTTTCAAATTTCTCAGTAGTATCAGTATGA 960 0.3031 MPIRIPNRLIQKKLWRILGFFSSIIGLISYAISSSFNQLFGNWNFIKIIIYTVVSFSITSMMLFLEKWKLSRRFLLKAHLGVLVLLLASFYSFVSDYKTLNQKPDLLSLISCSSFALMCFCLSRQIDLGFESDLLNFFLGMLTIHLMKINLMLSIIAAIFCYSLMVLRSKLDSRHEIGTLRVEDDVAIEIDAVDRNKNEFQSLRRRMNNNDGYNWKRYEEKFAKGSENQRSYYKCVGSNCVVKKRVERNIDGEIIETLYKGTHNHCMPTESTMKKNSSSEYLYSLLPLETGSIDFPDQSFGSEQLDSDEELSNFSVVSV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2812 319 ProSiteProfiles WRKY domain profile. 209 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2812 319 Pfam WRKY DNA -binding domain 210 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2812 319 Gene3D WRKY domain 194 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2812 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 274 IPR044810 GO:0003700
Tpr4g2812 319 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 3 274 - -
Tpr4g2812 319 SUPERFAMILY WRKY DNA-binding domain 206 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2812 319 SMART WRKY_cls 209 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2812 Tpr-Chr4 31688773 31690122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2812 210 293 WRKY Transcription Factor Family AT2G38470 38.824 1.16e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr4g2812 WRKY 1.5e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2812 - - ccaj:109792596 366.696