Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2811 ATGACACACACTAAATTTGACTCGAGAAGTCTTCGGTTTGAAGCTCATTCTGCATTTTTGGTATTGACTATCACCTCTGTCTATTCCTTTTTCTCTGATAAAATTATTAATGGAAAACCAGATGCATATAGTCTGATTTCGTGTGCTGCGTTCGCTCTTATGTCACTTAGTTTATCGAGGCAAATTCAGTGCGGATTTGAAGTGGATCTTATGTCCTTTTATCTAGGATGTTTAATTCTACAACTCATGAAGATTAACTATTTGTTAGCTATTGTTAGCTATTTATTTAATAGCTATTGTCTTATCATTCTTCGTTCTTCTTTCTCTTCCTTAAATGTTATACCGGAACCGCAGTGTCTTGGACTCGAAGAACAAAGAGTAGTCATTCAAGTTGATTTACAACAAGAAGATACTGATAGTGGTCATGTGAAAGGTAACTATAAATTGGTAGTGACTGACCACAACTTGATAACTGATGCGCTTCCTCATGAAACAATCAATAACCTTCATGAAACAGCGAAATTGATGGTGGATGCTGGTTTTGAGAAAGTGTGTTTCGAGGTTTACAACAGCTACCGTAAGCAATGGTTGGAAGACCTGTTAGGAAAGACGGGATTTCAAGATTACGTGGTTGGAAGATGGATTAAAACTTCAGAGGTTGCTCTCAAAGTACTATTTCCCAGTGAGCGTCGACTCTACAACCGTATCTTCTCGAATTCAATGTCTGCATTATCTGATCTCTATTTCTCAGAGCTTTGTCATGGAGCGATCACTGAACTACAGAATTTTGCTGATTCATTTGCAAATCGAAGCCCTTCAGCATGGCGTTTGTTTAAAATCCTTGACTTGTTTGCGACTTTGAGTGATCTAATTCCTAAATTTGAATTATTGTTTCTTGATTCGTTGGTGAACGGAGCAATAAAAATCAAGAATAGATTGGGTGAAATAAGTAGAAACAATTTCATGGAATTTGGGAACCTGATATTCTTTACACCGGATGCGGAGTTTGATTGTTGGGCTGATGGCGGAGTTCATCCAATGACCTGCGCAGCCACTGGCTACATCGTTATGGCTTCCTGGTCCAGACAAAACCTAGAGCAAATTTTACAACAATATCCCTTGGTTGATGCTGATAAAGCGGAGACATCTTTATTCTATTCGCAGATGGTGTTGATAATGGAGCAGTTTGAGAGCAAATTGGATGCTAAGTCACAAATTTATGAGGACCCTGCATTCCGCTATTTTTTCATGATGAATAATCTCGGGCATGTTACATACAGATTGGAAACCTTTTGGGAGTATAGGTTCGGTAAAAATGTGGAGCATTACTTTGAACTCTATTATAGGAACTCTTGGGATAAGGTGATCAATGTTTTGAAGATGGATATGAATGTGTCAGTGGCACCAAATTCTGAAACAGATTCAATGAAAGATAAGCTCAAGGTGTTCAATCAGAAGTTTAGGGAGATGTGTGGAATTCAATCTTATGAAAACTTCATTGGCATGTATGTTGGTAAAAACGCTGATGAGTATATCGAGTATGGAATATTTGACATTAAAGATCATCTTAACCGTTCATTTATATTACAGGATGTTGATTCTGTGAAAGGATTAGATGAAAATCAGTTAGTTAGTTAG 1638 0.3748 MTHTKFDSRSLRFEAHSAFLVLTITSVYSFFSDKIINGKPDAYSLISCAAFALMSLSLSRQIQCGFEVDLMSFYLGCLILQLMKINYLLAIVSYLFNSYCLIILRSSFSSLNVIPEPQCLGLEEQRVVIQVDLQQEDTDSGHVKGNYKLVVTDHNLITDALPHETINNLHETAKLMVDAGFEKVCFEVYNSYRKQWLEDLLGKTGFQDYVVGRWIKTSEVALKVLFPSERRLYNRIFSNSMSALSDLYFSELCHGAITELQNFADSFANRSPSAWRLFKILDLFATLSDLIPKFELLFLDSLVNGAIKIKNRLGEISRNNFMEFGNLIFFTPDAEFDCWADGGVHPMTCAATGYIVMASWSRQNLEQILQQYPLVDADKAETSLFYSQMVLIMEQFESKLDAKSQIYEDPAFRYFFMMNNLGHVTYRLETFWEYRFGKNVEHYFELYYRNSWDKVINVLKMDMNVSVAPNSETDSMKDKLKVFNQKFREMCGIQSYENFIGMYVGKNADEYIEYGIFDIKDHLNRSFILQDVDSVKGLDENQLVS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2811 545 Pfam Exo70 exocyst complex subunit 213 495 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2811 545 PANTHER PROTEIN, PUTATIVE-RELATED 7 495 - -
Tpr4g2811 545 Gene3D Exocyst complex component Exo70 126 532 - -
Tpr4g2811 545 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 495 IPR004140 GO:0000145|GO:0006887
Tpr4g2811 545 SUPERFAMILY Cullin repeat-like 151 525 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2811 Tpr-Chr4 31667410 31669410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2811 151 527 EXO70 exocyst subunit family AT5G58430 38.940 1.57e-86 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2811 - - lja:Lj2g3v2364680.2 444.891