Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2804 ATGGATGGTCTCAACTCTCAATCTCAGTCTCACACAGTCCGAAAACAATTCTTATACACTGTGGACAACATGATGCATATTCTAAATCAAATTGGGAGATGGTTGATGCAGCCAAATTTGTGGAGATTTATAGGCTTCGCGTCAGCTGTTGTTGGACTGCTCTGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAGAATGGAATTTGCTGAAAATATTTCTTTATAGTGTTTTCAGTTTCATCATATGCTTGGTGATTTTATTTGCAAAATTATTTCAACATTCGAGAAGTCTCCGGTTCAAAGCTCACACAGCATTTTTGGTATTGACAATCACCTCTGTTTATTCCTTTTTCTTCGATAAAGTGATGAATGGGAAACCAGATGCATATAGTTTAATTTCATGTGCTGCTTTTTCTATCATGTCATTGAGTTTGTCGAGGCAAACTCAATGCGGATTTGAAATTGATCTTCTCTATTTCTTCCTCGGATGTCTAATTGTGCAACTCATGAAGATTAAATTGCAGTTATTCATTCTTGGAGCAGGTTTCAGCTACTCTCTTATTATTCTCCGTTCTTTTTTCTCTTCTATTGATGCTAGAGGACATAATCAATACTCTCAATTCCAAGATGGAAACTCGGTGGTTCTTCATATTGATTCACTACAACTAGCTAATACTGATATTGCTTGTGCTAGAAGTAGAAATAACATCGATTCACCACCATTGGTGATCACTACTGATATTAGTAGTGTGATGGAACAACTCTGGACTTTTGTGAAGGCGCTTCAACAAGAAAATTTAAATCTCATTCAGATGGTTATGGATCATGTAAAAAACTATTGTGAACAACACTCTCCATTGGTGGCGACCGATCCTAACTTCATGATGGATGCGCTGAAGCCAGAAACAATCAAAGGCCTGGAGGAAACAGCGAAGGTTATGGTGAGCGCTGGGTTTGAGAAGGATTTTTCTGATGTGTACAACAGTTGCCGGAGGGAATGCTTGGACAAATGCCTAATGCATAGATTATTCATGTTAAAGAAACTCAGCAGCGAGGACATTCACGATATGCCATGGATGGATCTCGAAGACGAGATTAAAATATGGATTAGAGCTTTCAATGTCACCCTTAAGATACTTTTCCCAGGTGAGCGACAACTCTGTGATCGTGTCTTCTCCGGGTTCGCATCTGCAGCTGATTTCTCCTTCATTGAGATTTGCAGGGAATCCATCGTTCAACTTCTAAATTTTGCAGATTCTATTGCAGCCGGAAGTCATTCTCCAGAATGTTTGTTTAACATCATCGAGGTGTTTGAAACATTGCGTGACCTAATTCCAGAATTTGAGTCCTTATTTTGTGATCAGTACAGTGTGTCTCTAAAGAATGAAGCAATTACTATATGGAAGAAACTTGGGAAAGCAATTAGAAGTATTTTCATGGAGTTGGAGTATTTGCTTGACCAAAACTTGACGACGGGGACATATCTCAGCAGTGGTCTTCACCCGATTACTCAACATGTGGTGAACTATCTCCGTGTAGTTTCCCAATCACGGAAAACACTAGAGCAAGTTTTTGACGATTCCTCACTTTCTGGGAAGATTATTAATATTATGGATATATTGGAGAGTAATTTAAAAGCAAAGGCAAAATGCTACGAGGATCCTTCTTTAGGCTATATTTTCTTGATGAATAACAACACTTATATAATTCAGATGACCAAAGATAATGAACTAGGAATCCTTTTAGGGGATGAATGGTTCCAAAAACACACTCTGAAAATTTGGCACTACCATGAACAATATCAGATAACTTTGGGCACTATGCCCCCCACTTTAGTGCAAGATTTTTTCCCATTATTGTACATCAAACAACAGATAAAAGGTGTACGAAGGATCGAAGGATCAAAGGCGTACGAAGGAAATGTGCAGGAAATAGAAGCATTACTCTCTCAGCTACCAAAAAGTAGGAAAATGGAACCGGAGATAGAGATAAGAACAATAGTACTGATCTCTCCTGCACCACACGTTGAAAGCATAGAAAAAATGCCACCGAAAGACGGGTTTATCTGGAAAAAATATGGAAAGAAAGAGATACCTGACGTCAAATACCCGAGGAGTTACTATAGGTGCAGCCACATGAATTTAGATGCCTGTCAAGCCAAGAAGAAAGTACAACAACTTGGTGACAATCCAAACGTTTTTGAAGTAACATACAATGGTGCACATTCCTGCCGTATGTCCTTGACAATACCATCATTATTTTTACCAGCACGAAGGATCTCAAAGGATATGACTCAAACCACCATGCCGGCATCAACTTCATATTCTGAGTGGCTTTCATCGGGCACGCCAGCCAAATACATAAACTCTATCCCAACGGCCAAGCTAGCTGCTCCGGAAGACGGTGGGCATCATCCTATGACGGACAATGTCGTGGACTCTCTTATTTCTGATATCAGATCACAGCAGATCTATGCTGTTAATGGAGACGAAGAATTTTCACCAGAAACGGACAGGACAATGGAACTGTTAGAGAGCATATTGGCATCGATGTCCGAAAAATATGTGGACGCGTCTTTGCGTCATTTCTTCATGATGAATAATTGGAGATTCTTAGAAATGACACCTATAGGAATGCAACTGAATGCAATATTCGGCAATGTTTGGTTCCAAAGAAACAGAACAAAAGTCCAACAAAAACTTGAACTCTATAAAAGAGACTCATGGGATAAGGTGTTGGAATGTTTAAAGTTGGATATAAATGACTCCACGGAAATTAATTTTGCGACAGATTTGATGAAAGAAAAGCTCAATTTGTTTAACATGAAATTTACAGAAACATGTAGTGTTCAGTGCAGATGGTCTGTTCATGATGAGAAGCTAAGGGAAGAAATAATTGAATCTCTCAAAAATACCTTGTTGCCAGCATATGGAACCTTCATTGGGAAGTTTCAGGATTTTCTTAAAAACAAAGCTTACAAGTATATTGAGTATGGAATGTTTGATATTCAAGATGTACTTGATAGTTTGTTTCTTGGAAACAAGAAAGACGTATGA 3063 0.3869 MDGLNSQSQSHTVRKQFLYTVDNMMHILNQIGRWLMQPNLWRFIGFASAVVGLLCYALSSSFNYLFGEWNLLKIFLYSVFSFIICLVILFAKLFQHSRSLRFKAHTAFLVLTITSVYSFFFDKVMNGKPDAYSLISCAAFSIMSLSLSRQTQCGFEIDLLYFFLGCLIVQLMKIKLQLFILGAGFSYSLIILRSFFSSIDARGHNQYSQFQDGNSVVLHIDSLQLANTDIACARSRNNIDSPPLVITTDISSVMEQLWTFVKALQQENLNLIQMVMDHVKNYCEQHSPLVATDPNFMMDALKPETIKGLEETAKVMVSAGFEKDFSDVYNSCRRECLDKCLMHRLFMLKKLSSEDIHDMPWMDLEDEIKIWIRAFNVTLKILFPGERQLCDRVFSGFASAADFSFIEICRESIVQLLNFADSIAAGSHSPECLFNIIEVFETLRDLIPEFESLFCDQYSVSLKNEAITIWKKLGKAIRSIFMELEYLLDQNLTTGTYLSSGLHPITQHVVNYLRVVSQSRKTLEQVFDDSSLSGKIINIMDILESNLKAKAKCYEDPSLGYIFLMNNNTYIIQMTKDNELGILLGDEWFQKHTLKIWHYHEQYQITLGTMPPTLVQDFFPLLYIKQQIKGVRRIEGSKAYEGNVQEIEALLSQLPKSRKMEPEIEIRTIVLISPAPHVESIEKMPPKDGFIWKKYGKKEIPDVKYPRSYYRCSHMNLDACQAKKKVQQLGDNPNVFEVTYNGAHSCRMSLTIPSLFLPARRISKDMTQTTMPASTSYSEWLSSGTPAKYINSIPTAKLAAPEDGGHHPMTDNVVDSLISDIRSQQIYAVNGDEEFSPETDRTMELLESILASMSEKYVDASLRHFFMMNNWRFLEMTPIGMQLNAIFGNVWFQRNRTKVQQKLELYKRDSWDKVLECLKLDINDSTEINFATDLMKEKLNLFNMKFTETCSVQCRWSVHDEKLREEIIESLKNTLLPAYGTFIGKFQDFLKNKAYKYIEYGMFDIQDVLDSLFLGNKKDV* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2804 1020 Pfam Exo70 exocyst complex subunit 828 1010 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2804 1020 Pfam Exo70 exocyst complex subunit 371 604 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2804 1020 SUPERFAMILY WRKY DNA-binding domain 682 748 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2804 1020 PANTHER EXOCYST COMPLEX PROTEIN EXO70 45 604 IPR004140 GO:0000145|GO:0006887
Tpr4g2804 1020 PANTHER EXOCYST COMPLEX PROTEIN EXO70 788 1013 IPR004140 GO:0000145|GO:0006887
Tpr4g2804 1020 SUPERFAMILY Cullin repeat-like 799 1013 IPR016159 -
Tpr4g2804 1020 Gene3D WRKY domain 677 749 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2804 1020 Pfam WRKY DNA -binding domain 687 747 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2804 1020 ProSiteProfiles WRKY domain profile. 688 749 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2804 1020 Gene3D Exocyst complex component Exo70 247 617 - -
Tpr4g2804 1020 Gene3D Exocyst complex component Exo70 787 1019 - -
Tpr4g2804 1020 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 45 604 - -
Tpr4g2804 1020 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 788 1013 - -
Tpr4g2804 1020 SUPERFAMILY Cullin repeat-like 253 605 IPR016159 -
Tpr4g2804 1020 SMART WRKY_cls 686 748 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2804 Tpr-Chr4 31598794 31617668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2804 292 604 EXO70 exocyst subunit family AT5G58430 56.522 9.47e-110 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr4g2804 Exo70 3.7e-60 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2804 - - cam:101500706 1200.65