Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2802 ATGAAGTATTTTATAATCAAAATTCAAAGATGGCTTATGCATAAAAATGTATGGAGAGTTGTGGGCTTCATTGCAGCTGTTGTTGGATTGCTTTGTTATGCTCTCAGCTCTTCCTTCAACCATTTATTTGGAAATTGGAATTTGTTGAAAATATTTCTTTACTGTGTTTTCTGTTTCATTATCTGTTTGCTGATTTTATCAGCAATGATATGGAATCACTTGAGAAGTCTCAGGTTCCAAGTTCAATTCCCATTTTTGGTTTTAACCATTACCTCAGTATATTCCTTTTTCTCCGATAAAATGATCAATGGGAAACCAGATGCATTTAGCCTCATTTCAAGTGTTGCCTTTGCTATCATGTCTCTCAGTTTGTCGCGGCAAAGTCGGTGCGGATTTGAAGTCGATCTTCTTTACTTTTTTCTCGGAAATCTTATTGTGCAGCTCATGAAGATTAAATTGGCATTATTCATTGTTGGAGCTGGTTTCAGCTATTCTGTTATTATTCTTCGCTCTTCTTTTCGGTCCATTTCCATAGATGAAGGACAAATTAATGAGTACCCCAGAATCCAAGATGAAAATTCGGTAGTTCTTTGTGTCATTTCACCACAATTGGACAGTACTGATATTGCTAGTAGCATGATGGAACAGTTCAGGACTTGTGTGAATGCGATTCAGAAGGAAATGTTTTATGTCATGGACATTCTTTTGGAACAGCTAAAGGAATACTTTGAGGATACATCTGAGTTTATGATGTCAGAACGCAGCAGTGAAGGAGTGATCATATTGGAAGCACTGTGCCCGGAAACGGTCAACAACTTACAGGAAATAGTGAAGTTGATGGTGAACGCTGGTTTTGAGAAGGAGTGCTCCAATGTTTACAGCATTTGTCGGAGGCAATGCTTGGAGGAATGCCTAATAAAACAATTATTAGGTTTGGATAATCTTACTATCGAGGAACTTAACATGATTTCATTTAAGGATTTCAAACGCCGGGTTAAAAAATGGATTAAGGCTTCCAAGGTTGCTCTCAAGATATTGTTTCCCACCGAACGGCAACTCTGTGATATTGTTTTCTTCGGATTCTCTGCCATCTCCGATCTCTCGTTTACAGATGTTTGCAGGGAATGCGCCACTCATTGGCTGAATTTTCCCAAAGCCTTAGCGAATGAAAGCCATTTGCCAGAACAGTTGTTTAGAATGCTCGATGTGTTTGAAACATTGGGCGACCTAATTCCGAATTTTGAGTCTCTTTTTTGTTATCAATACAGTGTATCACTAACTAATGAAGCAAACACAGTTTTGAAGAAATTGGGAGAAGCAATAGTGTGCATTTTCACGGAGTTGGAAAATATGATTCACCAAGATCAGACGAATGCGCCAGTTCTTGTTCTTGGTGGCGGGCTTCACCCCATTGTTCGTTACATGATGAATTACCTAACCAACACATATGACTACCATGATATACTGGAGCAGTTATTTGAAGACCATGGACATATGTTGCAGCAATACGTCAAGCTTGATGATAATGTGCCCTCCTCGTCCTCTTTTTCATTGCAGATGGAACGGATTATGGAGGTATTGGAGACTAATTTGGAAGCCAAGTCCAAAATTTATAAAGACCCTGCTTTGTGCTGTATTTTCTTAATGAATAGCAGCAAGTACATAATTCGGAAGACAGAAGGTGGTGTCTTAAGGGCTCTTTTTGCGAATGGCTTGTTTGAAAGACACCAAGCAAAATTACAGCACAACTATGAGCAATATCTGAGAATCTCATGGAATAAGGTGCAAGGGTTTCTAATCCTGGGCAACAACGGATTAGTGCTTCCTGATATGGTAGAGAAGTCAATGAAGGAGAAGCTAGAATCTTTCAACATACTGTTTGAGGAAATATGCAGGGTTCAATCTTTGTGGTTTGTCTTGGATAAAGAGTTTAGGGAAGAAATAATAACTTCCATTGGGGAAATCTTGTTGCCAGCCTACGGAAACTTCATTCAGAGGTTCCAGAGTGTTCTGGAACTTGGAAAGCATGCTGATAGCTATACCATTAAGTATGGATTGGAGGATATTGAAGCAAGACTCAACGATTTGTTTCAGAGAATCATTCGATAA 2109 0.3893 MKYFIIKIQRWLMHKNVWRVVGFIAAVVGLLCYALSSSFNHLFGNWNLLKIFLYCVFCFIICLLILSAMIWNHLRSLRFQVQFPFLVLTITSVYSFFSDKMINGKPDAFSLISSVAFAIMSLSLSRQSRCGFEVDLLYFFLGNLIVQLMKIKLALFIVGAGFSYSVIILRSSFRSISIDEGQINEYPRIQDENSVVLCVISPQLDSTDIASSMMEQFRTCVNAIQKEMFYVMDILLEQLKEYFEDTSEFMMSERSSEGVIILEALCPETVNNLQEIVKLMVNAGFEKECSNVYSICRRQCLEECLIKQLLGLDNLTIEELNMISFKDFKRRVKKWIKASKVALKILFPTERQLCDIVFFGFSAISDLSFTDVCRECATHWLNFPKALANESHLPEQLFRMLDVFETLGDLIPNFESLFCYQYSVSLTNEANTVLKKLGEAIVCIFTELENMIHQDQTNAPVLVLGGGLHPIVRYMMNYLTNTYDYHDILEQLFEDHGHMLQQYVKLDDNVPSSSSFSLQMERIMEVLETNLEAKSKIYKDPALCCIFLMNSSKYIIRKTEGGVLRALFANGLFERHQAKLQHNYEQYLRISWNKVQGFLILGNNGLVLPDMVEKSMKEKLESFNILFEEICRVQSLWFVLDKEFREEIITSIGEILLPAYGNFIQRFQSVLELGKHADSYTIKYGLEDIEARLNDLFQRIIR* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2802 702 Pfam Exo70 exocyst complex subunit 333 695 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g2802 702 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 698 IPR004140 GO:0000145|GO:0006887
Tpr4g2802 702 Coils Coil 686 702 - -
Tpr4g2802 702 Gene3D Exocyst complex component Exo70 202 700 - -
Tpr4g2802 702 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 23 698 - -
Tpr4g2802 702 SUPERFAMILY Cullin repeat-like 212 697 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2802 Tpr-Chr4 31581276 31584132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2802 260 698 EXO70 exocyst subunit family AT5G58430 49.206 2.59e-138 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2802 - - cam:101502613 869.766