Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2800 ATGTCTGAAAACGGAGAAGAGAAATTACTCGCTGTGGCACGCCACATAGCAAAAACGCTAGGCCACAACAACAACATGGCTGATGATATTCTCCAAATTTTCTCAAACTTCGATGGAAGATTCTCGAAGGAAAATCTCTCCGAGAAAGTAGCGGTTCCAGAAACAGATCCAAGAGCATGCGCCGCACTGGATCACTGTCTCAAAAACCTCGACCGTCGGATCTCTCACTTTGTTTCCTCCGATCACCCTATCTGGGCGGATTCCGCCGACGCCGGTGCTTTCCTTGACGCCGTTGACGACTTAATCGCCTCCGTTGCTGAGTGGAACCACCTCACCGGTGATAAATCCATCGCCACGTGTCTTGTTCGTGCTGAGGATATGCTTCAGCACGCTATGTTTCGTCTTGAGGATGAGTTCCGATCTCTCATGGAACGGGGCGGTGAGTCGTTTGACCTAACGCAACCGTATCGGAACAGTGATTCAGCTGGAAACTTGTCGAATTTACCGTTTGATTCGGAAGAAGAGGAGGAAGAAATCGACGACGAAGGTAGAAATGGAGAAGATGATCTGATTCCGGTTGCTATGCCGGTAACTGATTACGACATCGTGATTGATGCGTTACCGTCGGCGACGATTAACGACCTTCACGAAATCGCGAAGCGAATGGTTGCTGGTGGATTTGGTAAAGAGTGTTCTCACGTGTACAGCAGTTGTAGAAGAGAGTTTTTGGAGGAAAGTCTCTCGAGATTAGGGTTACAGAAGCTTAGCATCGAAGATGTTCACAAGATGCCATGGAATGATATTGAAGACGAGATTGAAAGATGGATTAAAGCTTCCAACGTTGCTTTAAAGATACTTTTCACCAGCGAACGACGACTCTGCGATCGGGTTTTCTTCGGATTCTCCTCCGCCGCAGATTTCTCGTTTATGGAGGTTTGCAGAGGTTCTACAGTTCAGTTGTTGAATTTTGCTGACGCGGTTGCAATTGGAAGCCGTTCGCCTGAACGGTTGTTTAAAATTCTGGATGTGTTTGAAACATTGCGTGACCTAATTCCTGAATTTGAGGTGTTATTTTGTGATCAGTATAGTGTATCGTTAAGAAATGAAGCATTGACTATATGGAAGAGATTGGGGGAAGCAATTAGAGGGATTTTCATGGAGTTGGAGAATTTGATTCGCAGAGATCCAGCTAAGGCAGCTGTTCCGGGTGGTGGACTTCACCCGATTACTCGCTACGTGATGAATTATCTCCGCGCTGCGTGTCGGTCAAGACAGACATTGGAGCAAGTGTTTGAAGACTATGGACATCCATTGAAAGAATACCCTAAAATTGATGATAGAATGTCTTCATCTTCCTCTTTGTCAGTGCAAATGGATTGGATTATGGAGCTATTAGAGAGCAATTTGGAAGCCAAATCAAAAATCTATAAAGATCCTGCATTGTGCTATGTTTTCTTGATGAATAACTGCAGGTACATTGTTCAAAAGGCTGAAGATAGTGAATTAGGGTCACTTTTAGGTGATGATTGGATCAAAAAACACACTGCGAAAATTCGGCAGTACCATGTGCAGTATCAAAGAAGCTCATGGAATAAGGTGTTTGGGTTTCTGAAAGTTGAATACAATGGATCAATCCCACCTAATGGGGTAGCCAAGTCTATGAAAGAGAAGCTGAAATCATTCAACATGGTGTTTGATGATTTATGCAGGGTTCAATCTTCATGGTTTATCTTTGATGAACAACTTAGGGAAGAAATAAGAATTTCAATTGAGAAACTTTTGTTACCAGCTTATGAAAATTTCATGGCGAGGTTTCATAATATTGCTGAAGTTGGTAAGCATGCTGAGAAATACATTAAGTACGAAACAGAGGAGATTGAAGCAAGACTCAATGATTTGTTTCAGGGAAGCAGTGGATCAACTGGTAGCAGAAAGAGAAGCTAA 1944 0.4336 MSENGEEKLLAVARHIAKTLGHNNNMADDILQIFSNFDGRFSKENLSEKVAVPETDPRACAALDHCLKNLDRRISHFVSSDHPIWADSADAGAFLDAVDDLIASVAEWNHLTGDKSIATCLVRAEDMLQHAMFRLEDEFRSLMERGGESFDLTQPYRNSDSAGNLSNLPFDSEEEEEEIDDEGRNGEDDLIPVAMPVTDYDIVIDALPSATINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESLSRLGLQKLSIEDVHKMPWNDIEDEIERWIKASNVALKILFTSERRLCDRVFFGFSSAADFSFMEVCRGSTVQLLNFADAVAIGSRSPERLFKILDVFETLRDLIPEFEVLFCDQYSVSLRNEALTIWKRLGEAIRGIFMELENLIRRDPAKAAVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEDYGHPLKEYPKIDDRMSSSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNCRYIVQKAEDSELGSLLGDDWIKKHTAKIRQYHVQYQRSSWNKVFGFLKVEYNGSIPPNGVAKSMKEKLKSFNMVFDDLCRVQSSWFIFDEQLREEIRISIEKLLLPAYENFMARFHNIAEVGKHAEKYIKYETEEIEARLNDLFQGSSGSTGSRKRS* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2800 647 MobiDBLite consensus disorder prediction 163 188 - -
Tpr4g2800 647 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 635 IPR004140 GO:0000145|GO:0006887
Tpr4g2800 647 SUPERFAMILY Cullin repeat-like 85 634 IPR016159 -
Tpr4g2800 647 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 635 - -
Tpr4g2800 647 MobiDBLite consensus disorder prediction 170 185 - -
Tpr4g2800 647 Gene3D Exocyst complex component Exo70 84 644 - -
Tpr4g2800 647 Pfam Exo70 exocyst complex subunit 273 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2800 Tpr-Chr4 31572820 31578344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2800 1 638 EXO70 exocyst subunit family AT5G58430 69.171 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2800 K07195 - gmx:100803694 1016.14