Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2785 ATGGAGCTTCATATCATCCCTTTCTCTAATTTTACCTTCATGGCCTCCTTTCTCTTCATCTTGGTGTTATTCAAAATAGTTAAAAGATGGAGGTGTAACAATTCTACTATGAATTTACCACCAGGACCATGGACACTACCCCTCATAGGAAACATACATCAGATTATCAGTAGCTCATTGCCTCATCACTGCTTCAAAAATTTGGCAGAGAAATATGGACCCTTAATGCACCTAAAACTAGGAGAGGTATCATGCATAATAGTTAGTTCACCAGAAATGGCCAAAGAGATTATGAAAACAAATGACCTTACCTTTTGTAATAGGCCAAACCTTTTTTTAACCACAATACTTACTTACAATAATACAGATATTGTTTTCTCTGCATATGGAGAATACTGGAGGCAACTACGAAAGATATGCGTAATAGAGCTATTAAGTGCAAAGCGTGTCCAATCATTTAGATCAATAAGAGAAGAAGAAGTGTCAAATCTTGTTAAATCAATATCTGCAAGTGAAGGATCAGTTGTTAATCTGACTCAGAAGATTTTGGCAACGACATATGGGATATCAGCGCGGGCAGCTTTTGGGAAAAGGAATATACATCAAGAAGCGTTCATATTAGCAACGGAGAAAGCATTGAGCCTGTTGGGCTGTGTTAGTATTGTTGATTTGTATCCTTCTATTAAAATGCTTCGAAGGATGAGTAGGGCGAAAACCAAATTTGAAAAAGCTCAAAGAGATCTTGATATAATATTGCAAGACATAATCGATGATCATAAAAGAAGTCGTAATGAAGAAAGCAAGGATGAAGATCTAGTTGATGTTCTTCTTAATTATCAACAAGAAAATTATCACTCACAGTCACAGCATCCCTTGACCGATGATAATTTGAAAGCGGTCATCCAGGACTTGTTCACCGGTGGTGGAGAAACATCGTCAGGGGTTATGTTATGGGCAATGTCTGAGATGGTAAAAAACCCAAAAGTGATGAAAGAAGCACAAGCTGAGGTAAGAAGAGTGTTTGATGGAAAGGGTTTTGTGGACGAGACAGAGTTGCACCAATTGATATACTTAGAGTCTGTCATCAAAGAAACCATGAGACTACATCCTCCCCTACCGCTGTTAGTTCCAAAAGAAAGTAGAGAGAGATGCCAAATCAATGGATATGAGATCCCAGCAAAGACAAGGGTCATGGTTAACGTTTGGGCTATTGGAAGAGATCCAAGGTATTGGGTTGAAGCCGAGAGTTTTAAACCTGAAAGGTTTGTTAATAGCCCTATTGATTTCAAGGGCACAGACTTTGAATATATACCATTTGGTGCGGGTAGGAGGATGTGCCCTGGCATTGCATTTGCCATACCCAACGTTGAACTGCCTCTTGCTCAGTTACTTTACCACTTCGATTGGAAGCTTCCCAGTGGAATGAAGAATGAAGAGCTTGATATGACCGAGACATCTGGGATTACTGTAGGAAGAAAATACGATCTATGCTTGATTCCTATTACTCGTCGTACTTAA 1518 0.3913 MELHIIPFSNFTFMASFLFILVLFKIVKRWRCNNSTMNLPPGPWTLPLIGNIHQIISSSLPHHCFKNLAEKYGPLMHLKLGEVSCIIVSSPEMAKEIMKTNDLTFCNRPNLFLTTILTYNNTDIVFSAYGEYWRQLRKICVIELLSAKRVQSFRSIREEEVSNLVKSISASEGSVVNLTQKILATTYGISARAAFGKRNIHQEAFILATEKALSLLGCVSIVDLYPSIKMLRRMSRAKTKFEKAQRDLDIILQDIIDDHKRSRNEESKDEDLVDVLLNYQQENYHSQSQHPLTDDNLKAVIQDLFTGGGETSSGVMLWAMSEMVKNPKVMKEAQAEVRRVFDGKGFVDETELHQLIYLESVIKETMRLHPPLPLLVPKESRERCQINGYEIPAKTRVMVNVWAIGRDPRYWVEAESFKPERFVNSPIDFKGTDFEYIPFGAGRRMCPGIAFAIPNVELPLAQLLYHFDWKLPSGMKNEELDMTETSGITVGRKYDLCLIPITRRT* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2785 505 Gene3D Cytochrome P450 32 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Tpr4g2785 505 SUPERFAMILY Cytochrome P450 40 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 Pfam Cytochrome P450 40 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PANTHER CYTOCHROME P450 71D10 12 503 - -
Tpr4g2785 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PANTHER CYTOCHROME P450 71B11-RELATED 12 503 - -
Tpr4g2785 505 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2785 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2785 Tpr-Chr4 31305486 31307167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2785 13 500 Cytochrome P450 AT3G26300 42.169 9.89e-137 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2785 - - gmx:606548 663.299