Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2779 ATGAGGAACAGTAACAAAAAATCATTTATTGATTCACCAACAATTGATCAACTAGCTAAGGTTTCATACCACGACTTACACCGAGAAACTGATGGGTTCTCGGATAGAAACTTGATTGGAGCAGGAAGTTTTGGTTCTGTGTATAGAGGAAATCTTCCGTCAAAAGATAGTCTTGTTGCCGTAAAGGTCTTGAACCTCCAAAAAAAGGGAGCTCACAAAAGTTTCATTGTTGAATATTACAAAGATCAAGAATTTAAAGTTTTAGTATTTGATTACATGAAAAATGGAAGCTTAGACCAATGGTTGCATACTGAGCCTCCAATAAAATTGGACCTCAGTCAGAGATTAAACATCATTATTGATGTTGCTTCTGCATTACATTATCTTCATCAAGAATGTGAGCAATTGGTCCTTCATTGTGATTTAAAGTCAAGCAATGTCCTTCTTGATGATGACTTGGTTGCTCGTGATTTTGGCATAGCAAGACTTGTCTCAGTCATTGGAGATATCTCTCATAAAGATACTATTACAATTGGAATAAGAGGGACTCTTAGTTATGCTCCTCCTGTTTTAGAGTATGGATTGGGTTATGAAGTGTCCAGTGATATGTATAGCTTTGGAATCCCTATGTTGGAAATACTTACCGGTAGAAGACCCACTGACGAAGTTTTTGAAGATGGTCAAAATCTTCATAACTTTGTTGCAATTTCATTTCCTGGTAATCTTATTAAGATTTTGGACCCACATCTTGTGTCAAGAAATGGAGAATTAGGAACGGATGATCAAAATAGTGAGAATCTTATTCCAACTGTAAAGTGCTTAGTTTCACTTTTTAGAATTACTTATTTGTGCATTGGATGTCACCAGAGAGCTTAG 876 0.3596 MRNSNKKSFIDSPTIDQLAKVSYHDLHRETDGFSDRNLIGAGSFGSVYRGNLPSKDSLVAVKVLNLQKKGAHKSFIVEYYKDQEFKVLVFDYMKNGSLDQWLHTEPPIKLDLSQRLNIIIDVASALHYLHQECEQLVLHCDLKSSNVLLDDDLVARDFGIARLVSVIGDISHKDTITIGIRGTLSYAPPVLEYGLGYEVSSDMYSFGIPMLEILTGRRPTDEVFEDGQNLHNFVAISFPGNLIKILDPHLVSRNGELGTDDQNSENLIPTVKCLVSLFRITYLCIGCHQRA* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2779 291 Gene3D Transferase(Phosphotransferase) domain 1 93 289 - -
Tpr4g2779 291 Pfam Protein kinase domain 35 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2779 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Tpr4g2779 291 ProSiteProfiles Protein kinase domain profile. 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2779 291 PANTHER LRR RECEPTOR-LIKE KINASE 80 284 - -
Tpr4g2779 291 PANTHER LRR RECEPTOR-LIKE KINASE 1 78 - -
Tpr4g2779 291 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Tpr4g2779 291 SMART serkin_6 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2779 291 PANTHER OS04G0122200 PROTEIN 80 284 - -
Tpr4g2779 291 PANTHER OS04G0122200 PROTEIN 1 78 - -
Tpr4g2779 291 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Tpr4g2779 291 SUPERFAMILY Protein kinase-like (PK-like) 6 227 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2779 Tpr-Chr4 31212852 31213897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2779 20 284 Receptor kinase-like Gene Family AT3G47580 40.134 1.35e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr4g2779 Pkinase 5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2779 - - mtr:MTR_5g025930 390.193