Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2769 ATGATATACACTTCATCCCTTAGAAGTCCAAAGAAAGAAGAGCATGAAGTACCACAAATTATCACTCCAACACTACCAAACTTCAACAAATCTTACACTCGTGAAGATTTCTATATTTTCGACGAACTTGAAGAGTACTTGAACGAAGAAGACGAACAAAAGTTATCGCCACAAAACACTTGTAATAGTAGTATTGAGGTTCATTGGGATTTAATGGAATGGGAGGAATTTTCCTTTGTTGAAGGGAAATATGAGAACATAAGCAAATGTAATATTGATGAGAAGAAGATTATAAAGAGAGAAAATTACAATGATGGATTTTGGGAAGTGGATGATGAAAAGAGTGTGGCTTTGAATTTGAATTTGAACTATCAAGAGGTTTTGGATGCATGGTCTGACCGTGGTTCACTATGGGCTGATGATTGTTCTCTTAATTCATTGTCCTCTTCCAATAATTGCTCCTATATGGGAGAAGTGCCAATATTGGAAGAAGAAAGAGCAAGAAGAGAAGCAAGTGTTCTTAGGTACAAAGAAAAACGTCAGAACAGATTGTTTTCCAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCAAGAATCAAGGGACGCTTTGTGAAGAGACACTAA 639 0.3599 MIYTSSLRSPKKEEHEVPQIITPTLPNFNKSYTREDFYIFDELEEYLNEEDEQKLSPQNTCNSSIEVHWDLMEWEEFSFVEGKYENISKCNIDEKKIIKRENYNDGFWEVDDEKSVALNLNLNYQEVLDAWSDRGSLWADDCSLNSLSSSNNCSYMGEVPILEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2769 212 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 212 - -
Tpr4g2769 212 Pfam CCT motif 169 211 IPR010402 GO:0005515
Tpr4g2769 212 PANTHER CCT MOTIF FAMILY PROTEIN 3 212 - -
Tpr4g2769 212 ProSiteProfiles CCT domain profile. 169 211 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2769 Tpr-Chr4 31025337 31027082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2769 88 211 C2C2-CO-like Transcription Factor Family AT1G73870 41.135 1.45e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr4g2769 CCT 2.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2769 - - cam:101495184 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2769 4 31025337 31027082 Tpr4g2769 4 31025337 31027082 ECH