Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2766 ATGGGAAAGTTTTGGCTTATTGGGATTTTCATTGTTGCAACCTATGCCTGTAATTTTCTAGGAACAAGGGTAGTAGTAGAAGGGTACCCAATTGAGGATCTGATTGTTAGTCTACCAGGACAACCTAAAGTTAAATTCAGTCAATATGCTGGCTATATTGATATTGATGTAAAACATGGTAGAAGTCTTTTCTATTATTTTGTTGAGGCTGACCATCAACCTCATCAAAAACCACTCACCCTTTGGCTTAATGGAGGTCCTGGATGTTCATCCATTGGAGGAGGTGCCTTTACTGAATTGGGTCCGTTTTTTCCTAATGGTGATGGACGCGGTCTACGAAAGAATTCAATGTCTTGGAATAGAGCTTCGAATCTCCTCTTTGTCGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACAGCTTCTGATTATAACATCGGTGACGCCTCCACAGCCAATGATATGCTGTTGTTCTTCCTGAAATGGTATGAGAAGTTTCCTACCTACAGATCAAGAGAGTTGTTTCTTACCGGAGAAAGCTATGCAGGACATTACATACCTCAGTTGGCTAATGCTATTCTTGATTATAATGCTCATTCAACCGGTTACAAATTCAAATTGAAAGGAGTTGCTATTGGAAACCCACTTTTGAATCTCGATCGTGATGCACAAGCAACATATGACTACTTCTGGTCACACGGAATGATTTCGGATGAAATTGGCCTTGCCATTACGAAGGATTGCGATTTCGATGATTATACTTTTACAAATCCTCATAATGTATCTGAATCATGCTACAATGCAACCAGCGATGCTTATAAAATTGTTGGAGATTATATAAACAACTACGATGTGATTCTCGATGTTTGTTATCCATCTATTGTTGAACAAGAATTGAGATTGAAAAAGATGGCTACTAAAATAAGTGTAGGGGTAGATGTCTGTATGAGTTATGAAAGACGTTTTTACTTTAACCTTCCGGAGGTTCAAAAGGCTCTTCATGCAAACCGTACCAATTTGCCGTATCCATGGTCCATGTGCAGCGGTGTTTTAAATTACAGTGATACCGATCCTAACATTAATATGCTTCCAATTCTCAAACGGATTGTTCAAAACCATATTCCAGTATGGGTTTTCAGTGGAGACCAAGATTCTGTTGTGCCATTACTTGGTTCTAGAACACTCATCCGTGAACTAGCGCACGACCTGAAGTTCAAGATTACAGTCCCATATGGTGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACCGAGTACGGAAATTTGTTAACTTTCGCCACCGTAAGAGGAGCAGCGCACATGGTACCATATGCACAACCTTCTAGAGCACTGCATCTATTCAGTTCCTTTGTGAACGGTAGGAGATTGCCGAACACAACTCGTCCGTCAGTTGGTGGATGA 1428 0.409 MGKFWLIGIFIVATYACNFLGTRVVVEGYPIEDLIVSLPGQPKVKFSQYAGYIDIDVKHGRSLFYYFVEADHQPHQKPLTLWLNGGPGCSSIGGGAFTELGPFFPNGDGRGLRKNSMSWNRASNLLFVESPAGVGWSYSNTASDYNIGDASTANDMLLFFLKWYEKFPTYRSRELFLTGESYAGHYIPQLANAILDYNAHSTGYKFKLKGVAIGNPLLNLDRDAQATYDYFWSHGMISDEIGLAITKDCDFDDYTFTNPHNVSESCYNATSDAYKIVGDYINNYDVILDVCYPSIVEQELRLKKMATKISVGVDVCMSYERRFYFNLPEVQKALHANRTNLPYPWSMCSGVLNYSDTDPNINMLPILKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHDLKFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVNGRRLPNTTRPSVGG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2766 475 PANTHER CARBOXYPEPTIDASE 8 469 - -
Tpr4g2766 475 Gene3D - 363 462 - -
Tpr4g2766 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 469 IPR001563 GO:0004185|GO:0006508
Tpr4g2766 475 SUPERFAMILY alpha/beta-Hydrolases 25 469 IPR029058 -
Tpr4g2766 475 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Tpr4g2766 475 Pfam Serine carboxypeptidase 40 462 IPR001563 GO:0004185|GO:0006508
Tpr4g2766 475 Gene3D alpha/beta hydrolase 31 292 IPR029058 -
Tpr4g2766 475 Gene3D - 316 352 - -
Tpr4g2766 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Tpr4g2766 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Tpr4g2766 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Tpr4g2766 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185|GO:0006508
Tpr4g2766 475 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2766 Tpr-Chr4 31004833 31009527 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2766 322 465 Calmodulin-binding Proteins AT2G22960 25.694 4.11e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2766 K16297 - gmx:100803335 846.654